CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_6AS_DBE4E3146
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_6AS_DBE4E3146
T281240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN
NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.722
0.830
AT2G20400
M07046_2.00
Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN
Dap-seq
OMalley et al.(2016)
AT2G20400_col_a
0.685
0.809
AT2G20400
M07047_2.00
Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY
Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a
0.685
0.809
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.673
0.745
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.673
0.745
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6AS_DBE4E3146.2
Myb
231
282
RMRWTLELHERFVEALKKLGGLEKATPKGVLKLMKVEGLTIFHVKSHLQNYR
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
173 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05042
Aegilops tauschii
F775_05042
I
0.894
Traes_6BS_00D311B94
Triticum aestivum
Traes_6BS_00D311B94
I
0.894
Traes_6DS_20D189350
Triticum aestivum
Traes_6DS_20D189350
I
0.894
MLOC_5837
Hordeum vulgare
MLOC_5837
I
0.886
BRADI3G03538
Brachypodium distachyon
BRADI3G03538
I
0.827
ORGLA06G0222600
Oryza glaberrima
ORGLA06G0222600
I
0.805
OB06G34350
Oryza brachyantha
OB06G34350
I
0.805
OS06G0703900
Oryza sativa
OS06G0703900
I
0.805
MLOC_54829
Hordeum vulgare
MLOC_54829
I
0.805
Pavir.J14911
Panicum virgatum
Pavir.J14911
I
0.805
Si017191m.g
Setaria italica
Si017191m.g
I
0.805
Traes_7DL_090D0E08E
Triticum aestivum
Traes_7DL_090D0E08E
I
0.805
TRIUR3_32904
Triticum urartu
TRIUR3_32904
I
0.805
Traes_7BL_09DD5A1DC
Triticum aestivum
Traes_7BL_09DD5A1DC
I
0.805
Traes_7AL_D45376F32
Triticum aestivum
Traes_7AL_D45376F32
I
0.805
Pavir.Db00228
Panicum virgatum
Pavir.Db00228
I
0.805
F775_29452
Aegilops tauschii
F775_29452
I
0.805
Pavir.Aa03223
Panicum virgatum
Pavir.Aa03223
I
0.805
Si006354m.g
Setaria italica
Si006354m.g
I
0.805
BGIOSGA023563
Oryza indica
BGIOSGA023563
I
0.805
Sb10g029200
Sorghum bicolor
Sb10g029200
I
0.799
Pavir.J27649
Panicum virgatum
Pavir.J27649
I
0.787
GSMUA_Achr10G23260_001
Musa acuminata
GSMUA_Achr10G23260_001
I
0.766
PDK_20s1523411g004
Phoenix dactylifera
PDK_20s1523411g004
I
0.766
GSMUA_Achr7G15740_001
Musa acuminata
GSMUA_Achr7G15740_001
I
0.758
BRADI1G34470
Brachypodium distachyon
BRADI1G34470
I
0.757
PK01823.1
Cannabis sativa
PK01823.1
I
0.753
OBART02G03200
Oryza barthii
OBART02G03200
I
0.751
OGLUM02G03100
Oryza glumaepatula
OGLUM02G03100
I
0.751
ONIVA02G03010
Oryza nivara
ONIVA02G03010
I
0.751
OMERI02G03860
Oryza meridionalis
OMERI02G03860
I
0.751
PHR3
Oryza sativa
OS02G0139000
I
0.751
PHR3
Oryza indica
BGIOSGA007162
I
0.751
OB02G12880
Oryza brachyantha
OB02G12880
I
0.751
ORUFI02G03130
Oryza rufipogon
ORUFI02G03130
I
0.751
OPUNC02G02530
Oryza punctata
OPUNC02G02530
I
0.751
ORGLA02G0030200
Oryza glaberrima
ORGLA02G0030200
I
0.751
GRMZM2G010920
Zea mays
GRMZM2G010920
I
0.748
ORUFI02G38560
Oryza rufipogon
ORUFI02G38560
I
0.743
OLONG_010553
Oryza longistaminata
OLONG_010553
I
0.743
BGIOSGA005373
Oryza indica
BGIOSGA005373
I
0.743
OB02G43730
Oryza brachyantha
OB02G43730
I
0.743
LPERR02G03030
Leersia perrieri
LPERR02G03030
I
0.733
POPTR_0007s15110
Populus trichocarpa
POPTR_0007s15110
I
0.732
Gorai.011G001500
Gossypium raimondii
Gorai.011G001500
I
0.732
SapurV1A.0703s0050
Salix purpurea
SapurV1A.0703s0050
I
0.732
evm.TU.supercontig_10.14
Carica papaya
evm.TU.supercontig_10.14
I
0.732
POPTR_0014s00280
Populus trichocarpa
POPTR_0014s00280
I
0.726
VIT_09s0054g01620
Vitis vinifera
VIT_09s0054g01620
I
0.726
Aquca_017_00793
Aquilegia coerulea
Aquca_017_00793
I
0.722
ONIVA03G17050
Oryza nivara
ONIVA03G17050
I
0.722
PHR1
Oryza sativa
OS03G0329900
D
0.722
ORGLA03G0154000
Oryza glaberrima
ORGLA03G0154000
I
0.722
Eucgr.A01323
Eucalyptus grandis
Eucgr.A01323
I
0.722
Solyc06g008200.2
Solanum lycopersicum
Solyc06g008200.2
I
0.722
OPUNC03G15590
Oryza punctata
OPUNC03G15590
I
0.722
OMERI03G14370
Oryza meridionalis
OMERI03G14370
I
0.722
LPERR03G14050
Leersia perrieri
LPERR03G14050
I
0.722
OB03G25800
Oryza brachyantha
OB03G25800
I
0.722
PHR1
Oryza indica
BGIOSGA012553
I
0.722
evm.TU.supercontig_87.3
Carica papaya
evm.TU.supercontig_87.3
I
0.722
OLONG_005622
Oryza longistaminata
OLONG_005622
I
0.722
PRUPE_ppa005159mg
Prunus persica
PRUPE_ppa005159mg
I
0.714
Pm013132
Prunus mume
Pm013132
I
0.714
Eucgr.F04055
Eucalyptus grandis
Eucgr.F04055
I
0.714
gene05518-v1.0-hybrid
Fragaria vesca
gene05518-v1.0-hybrid
I
0.714
LPERR02G30520
Leersia perrieri
LPERR02G30520
I
0.711
BRADI1G63530
Brachypodium distachyon
BRADI1G63530
I
0.711
mgf005047m
Mimulus guttatus
mgf005047m
I
0.704
Sb04g003140
Sorghum bicolor
Sb04g003140
I
0.704
Gorai.011G291200
Gossypium raimondii
Gorai.011G291200
I
0.704
Solyc09g072830.2
Solanum lycopersicum
Solyc09g072830.2
I
0.704
Sb02g010520
Sorghum bicolor
Sb02g010520
I
0.700
Traes_3AS_6EEB8D2B2
Triticum aestivum
Traes_3AS_6EEB8D2B2
I
0.700
PHR2
Oryza indica
BGIOSGA025605
I
0.700
Pavir.Bb01566
Panicum virgatum
Pavir.Bb01566
I
0.700
BRADI1G28920
Brachypodium distachyon
BRADI1G28920
I
0.700
Si029945m.g
Setaria italica
Si029945m.g
I
0.700
F775_09823
Aegilops tauschii
F775_09823
I
0.700
TRAES3BF104900050CFD_g
Triticum aestivum
TRAES3BF104900050CFD_g
I
0.700
Pavir.Ba02554
Panicum virgatum
Pavir.Ba02554
I
0.700
OMERI07G09960
Oryza meridionalis
OMERI07G09960
I
0.700
ONIVA07G10340
Oryza nivara
ONIVA07G10340
I
0.700
PHR2
Oryza sativa
OS07G0438800
I
0.700
OGLUM07G11980
Oryza glumaepatula
OGLUM07G11980
I
0.700
OB07G18720
Oryza brachyantha
OB07G18720
I
0.700
OBART07G12530
Oryza barthii
OBART07G12530
I
0.700
GRMZM2G162409
Zea mays
GRMZM2G162409
I
0.700
OLONG_021629
Oryza longistaminata
OLONG_021629
I
0.700
OPUNC07G11150
Oryza punctata
OPUNC07G11150
I
0.700
ORUFI07G12650
Oryza rufipogon
ORUFI07G12650
I
0.700
ORGLA07G0105500
Oryza glaberrima
ORGLA07G0105500
I
0.700
LPERR07G10540
Leersia perrieri
LPERR07G10540
I
0.700
Bo4g025360
Brassica oleracea
Bo4g025360
I
0.697
Bra004973
Brassica rapa
Bra004973
I
0.697
BRADI3G55120
Brachypodium distachyon
BRADI3G55120
I
0.694
TRIUR3_02291
Triticum urartu
TRIUR3_02291
I
0.694
Traes_6BL_5D8EE6802
Triticum aestivum
Traes_6BL_5D8EE6802
I
0.694
orange1.1g017464m.g
Citrus sinensis
orange1.1g017464m.g
I
0.686
Ciclev10011992m.g
Citrus clementina
Ciclev10011992m.g
I
0.686
AT2G20400
Arabidopsis thaliana
AT2G20400
D
0.685
30169.m006598
Ricinus communis
30169.m006598
I
0.683
cassava22661.valid.m1
Manihot esculenta
cassava22661.valid.m1
I
0.683
Gorai.009G120900
Gossypium raimondii
Gorai.009G120900
I
0.683
29680.m001711
Ricinus communis
29680.m001711
I
0.683
Lus10035705.g
Linum usitatissimum
Lus10035705.g
I
0.683
Cla003565
Citrullus lanatus
Cla003565
I
0.683
cassava35980.valid.m1
Manihot esculenta
cassava35980.valid.m1
I
0.683
Cucsa.027530
Cucumis sativus
Cucsa.027530
I
0.683
cassava44101.valid.m1
Manihot esculenta
cassava44101.valid.m1
I
0.683
cassava35979.valid.m1
Manihot esculenta
cassava35979.valid.m1
I
0.683
cassava39270.m1
Manihot esculenta
cassava39270.m1
I
0.683
Ciclev10030185m.g
Citrus clementina
Ciclev10030185m.g
I
0.683
orange1.1g011006m.g
Citrus sinensis
orange1.1g011006m.g
I
0.683
TCM_027630
Theobroma cacao
TCM_027630
I
0.683
PGSC0003DMG400023467
Solanum tuberosum
PGSC0003DMG400023467
I
0.683
Solyc05g055940.2
Solanum lycopersicum
Solyc05g055940.2
I
0.683
Traes_4DL_2C27C34AF
Triticum aestivum
Traes_4DL_2C27C34AF
I
0.680
MLOC_5585
Hordeum vulgare
MLOC_5585
I
0.680
F775_09615
Aegilops tauschii
F775_09615
I
0.680
Traes_4AS_7220D33B3
Triticum aestivum
Traes_4AS_7220D33B3
I
0.680
MLOC_60198
Hordeum vulgare
MLOC_60198
I
0.679
BRADI5G20520
Brachypodium distachyon
BRADI5G20520
I
0.679
Lus10037296.g
Linum usitatissimum
Lus10037296.g
I
0.677
PRUPE_ppa023008mg
Prunus persica
PRUPE_ppa023008mg
I
0.675
PDK_20s1301376g001
Phoenix dactylifera
PDK_20s1301376g001
I
0.675
MDP0000241055
Malus domestica
MDP0000241055
I
0.675
MDP0000773970
Malus domestica
MDP0000773970
I
0.675
TCM_039819
Theobroma cacao
TCM_039819
I
0.675
MLOC_65279
Hordeum vulgare
MLOC_65279
I
0.674
PHL6
Arabidopsis thaliana
AT3G13040
D
0.673
Aquca_012_00204
Aquilegia coerulea
Aquca_012_00204
N
0.670
VIT_08s0007g06310
Vitis vinifera
VIT_08s0007g06310
I
0.670
Aquca_009_00165
Aquilegia coerulea
Aquca_009_00165
N
0.670
MLOC_52271
Hordeum vulgare
MLOC_52271
I
0.669
GRMZM2G124495
Zea mays
GRMZM2G124495
I
0.669
BRADI5G25320
Brachypodium distachyon
BRADI5G25320
I
0.669
VIT_09s0070g00410
Vitis vinifera
VIT_09s0070g00410
I
0.667
Cucsa.037070
Cucumis sativus
Cucsa.037070
I
0.665
Cla006047
Citrullus lanatus
Cla006047
I
0.665
mgf011847m
Mimulus guttatus
mgf011847m
I
0.664
SapurV1A.0252s0390
Salix purpurea
SapurV1A.0252s0390
I
0.662
Pavir.J39104
Panicum virgatum
Pavir.J39104
I
0.662
chr1.CM0295.930.nd
Lotus japonicus
chr1.CM0295.930.nd
I
0.662
GLYMA10G04540
Glycine max
GLYMA10G04540
I
0.662
Ca_12255
Cicer arietinum
Ca_12255
I
0.662
GSMUA_Achr5G12960_001
Musa acuminata
GSMUA_Achr5G12960_001
I
0.662
GRMZM2G006477
Zea mays
GRMZM2G006477
I
0.662
GLYMA19G35080
Glycine max
GLYMA19G35080
I
0.662
GLYMA18G43130
Glycine max
GLYMA18G43130
I
0.662
GLYMA13G18805
Glycine max
GLYMA13G18805
I
0.662
PK01035.1
Cannabis sativa
PK01035.1
I
0.662
Pavir.Ia03429
Panicum virgatum
Pavir.Ia03429
I
0.662
orange1.1g011805m.g
Citrus sinensis
orange1.1g011805m.g
I
0.662
GLYMA03G32350
Glycine max
GLYMA03G32350
I
0.662
Lus10022886.g
Linum usitatissimum
Lus10022886.g
I
0.662
Si035682m.g
Setaria italica
Si035682m.g
I
0.662
AMTR_s00142p00049490
Amborella trichopoda
AMTR_s00142p00049490
I
0.662
Ciclev10019956m.g
Citrus clementina
Ciclev10019956m.g
I
0.662
VIT_07s0005g04120
Vitis vinifera
VIT_07s0005g04120
I
0.662
TCM_003939
Theobroma cacao
TCM_003939
I
0.662
cassava37547.valid.m1
Manihot esculenta
cassava37547.valid.m1
I
0.662
TCM_026171
Theobroma cacao
TCM_026171
I
0.662
Sb01g036440
Sorghum bicolor
Sb01g036440
I
0.662
MTR_7g098250
Medicago truncatula
MTR_7g098250
I
0.662
Lus10024938.g
Linum usitatissimum
Lus10024938.g
I
0.662
MDP0000285150
Malus domestica
MDP0000285150
I
0.662
MDP0000321461
Malus domestica
MDP0000321461
I
0.662
cassava31821.valid.m1
Manihot esculenta
cassava31821.valid.m1
I
0.662
Lus10022885.g
Linum usitatissimum
Lus10022885.g
I
0.662
Gorai.007G149100
Gossypium raimondii
Gorai.007G149100
I
0.662
29637.m000753
Ricinus communis
29637.m000753
I
0.662
GSMUA_Achr8G12580_001
Musa acuminata
GSMUA_Achr8G12580_001
I
0.662