CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_09080
(
Cicer arietinum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Ca_09080
T282986_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR10
M02702_2.00
Arabidopsis thaliana
AGATHYKN
NMRDATCT
SELEX
Mathelier et al.(2014)
MA0121.1
0.797
0.830
ARR10
M11045_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ARR10_01
0.797
0.830
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.747
0.872
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.745
0.872
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_09080
Myb
204
254
RVVWSVELHRKFVAAVNHLGVDKAVPKKILDLMNVEKLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Cicer arietinum
TFs
308 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy