Pm013020 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm013020 T283522_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.883 0.968
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.798 0.903
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH

DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.690 0.763
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH

DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.690 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm013020 Myb 14 61
Pm013020 Myb 67 112

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AARA011081 Anopheles arabiensis AARA011081 N 0.000
AATE005226 Anopheles atroparvus AATE005226 N 0.000
ACOM029903 Anopheles coluzzii ACOM029903 N 0.000
ACUA009110 Anopheles culicifacies ACUA009110 N 0.000
AEPI001398 Anopheles epiroticus AEPI001398 N 0.000
AFAF017433 Anopheles farauti AFAF017433 N 0.000
AFUN008889 Anopheles funestus AFUN008889 N 0.000
AGAP028230 Anopheles gambiae AGAP028230 N 0.000
AMAM021913 Anopheles maculatus AMAM021913 N 0.000
AMEC012061 Anopheles melas AMEC012061 N 0.000
AMEM004143 Anopheles merus AMEM004143 N 0.000
AMIN014756 Anopheles minimus AMIN014756 N 0.000
AQUA003528 Anopheles quadriannulatus AQUA003528 N 0.000
ASTEI03736 Anopheles stephensi ASTEI03736 N 0.000