cassava41279.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava41279.m1 T284269_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41279.m1 Myb 14 61
cassava41279.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.724
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.781
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.824
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.713
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.838
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.662
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.691
Bo7g091360 Brassica oleracea Bo7g091360 N 0.730
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.713
Bra002448 Brassica rapa Bra002448 I 0.668
Bra025337 Brassica rapa Bra025337 N 0.730
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.713
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.713
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.797
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.835
Ca_10555 Cicer arietinum Ca_10555 N 0.807
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.726
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.742
Cla019436 Citrullus lanatus Cla019436 N 0.726
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.769
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.806
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.662
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.674
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.674
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.746
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.751
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.675
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.675
F775_14388 Aegilops tauschii F775_14388 I 0.679
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.756
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.780
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.780
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.762
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.661
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.662
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.711
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.662
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.679
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.691
LPERR12G16630 Leersia perrieri LPERR12G16630 N 0.668
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.837
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.721
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.721
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.837
MDP0000258046 Malus domestica MDP0000258046 N 0.790
mgf012871m Mimulus guttatus mgf012871m I 0.777
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.668
MTR_3g045430 Medicago truncatula MTR_3g045430 N 0.684
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.807
MYB35 Arabidopsis thaliana AT3G28470 N 0.726
OB03G23760 Oryza brachyantha OB03G23760 I 0.679
OBART03G13840 Oryza barthii OBART03G13840 I 0.679
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.679
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.679
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.679
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.679
OPUNC12G18070 Oryza punctata OPUNC12G18070 I 0.677
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.726
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.679
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.691
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.679
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.691
OS05G0553400 Oryza sativa OS05G0553400 I 0.691
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.662
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.661
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.694
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.738
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.714
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.773
Pm015813 Prunus mume Pm015813 N 0.725
Pm024633 Prunus mume Pm024633 N 0.683
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.734
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.736
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.742
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.683
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.714
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.678
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.780
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.662
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.661
Si022874m.g Setaria italica Si022874m.g I 0.670
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.773
TCM_018082 Theobroma cacao TCM_018082 N 0.762
TCM_045715 Theobroma cacao TCM_045715 N 0.762
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.730
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.679
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.679
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.679
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.668
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.668
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.746