cassava5173.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava5173.m1 T284323_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.699 0.904
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.669 0.872
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.669 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava5173.m1 Myb 14 61
cassava5173.m1 Myb 67 149

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0011s12750 Populus trichocarpa POPTR_0011s12750 I 0.807
Ciclev10009050m.g Citrus clementina Ciclev10009050m.g I 0.805
orange1.1g045387m.g Citrus sinensis orange1.1g045387m.g I 0.805
MYB49 Vitis vinifera VIT_19s0014g03820 I 0.802
SapurV1A.4146s0010 Salix purpurea SapurV1A.4146s0010 I 0.788
SapurV1A.0495s0050 Salix purpurea SapurV1A.0495s0050 I 0.788
TCM_031294 Theobroma cacao TCM_031294 I 0.782
Gorai.002G077200 Gossypium raimondii Gorai.002G077200 I 0.777
POPTR_0001s41920 Populus trichocarpa POPTR_0001s41920 I 0.768
SapurV1A.0840s0010 Salix purpurea SapurV1A.0840s0010 I 0.768
cassava44885.m1 Manihot esculenta cassava44885.m1 I 0.739
LPERR08G15530 Leersia perrieri LPERR08G15530 I 0.735
Pm011657 Prunus mume Pm011657 I 0.734
PRUPE_ppa021577mg Prunus persica PRUPE_ppa021577mg I 0.734
AMTR_s00003p00271440 Amborella trichopoda AMTR_s00003p00271440 I 0.734
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I 0.731
MDP0000144751 Malus domestica MDP0000144751 I 0.728
evm.TU.supercontig_12.22 Carica papaya evm.TU.supercontig_12.22 I 0.726
cassava19500.valid.m1 Manihot esculenta cassava19500.valid.m1 I 0.723
F775_12010 Aegilops tauschii F775_12010 I 0.718
evm.TU.supercontig_27.135 Carica papaya evm.TU.supercontig_27.135 I 0.718
GLYMA13G35810 Glycine max GLYMA13G35810 I 0.717
GLYMA12G34650 Glycine max GLYMA12G34650 I 0.717
Aquca_038_00198 Aquilegia coerulea Aquca_038_00198 I 0.716
GRMZM2G166337 Zea mays GRMZM2G166337 I 0.714
MLOC_62436 Hordeum vulgare MLOC_62436 I 0.714
Cla019747 Citrullus lanatus Cla019747 I 0.713
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.713
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.713
Pm002011 Prunus mume Pm002011 I 0.707
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.707
MDP0000320772 Malus domestica MDP0000320772 I 0.707
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.707
MTR_2g011660 Medicago truncatula MTR_2g011660 I 0.703
Ca_00232 Cicer arietinum Ca_00232 I 0.703
MDP0000228252 Malus domestica MDP0000228252 I 0.703
MDP0000302984 Malus domestica MDP0000302984 I 0.703
GLYMA07G30860 Glycine max GLYMA07G30860 I 0.703
GLYMA13G32090 Glycine max GLYMA13G32090 I 0.703
GLYMA15G07230 Glycine max GLYMA15G07230 I 0.703
MDP0000492221 Malus domestica MDP0000492221 I 0.702
Pavir.Db01850 Panicum virgatum Pavir.Db01850 I 0.701
Eucgr.F01069 Eucalyptus grandis Eucgr.F01069 I 0.701
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.700
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.700
orange1.1g045434m.g Citrus sinensis orange1.1g045434m.g I 0.700
Ciclev10026023m.g Citrus clementina Ciclev10026023m.g I 0.700
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.700
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.700
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.700
AtMYB74 Arabidopsis lyrata Al_scaffold_0006_3584 I 0.699
Eucgr.E03689 Eucalyptus grandis Eucgr.E03689 I 0.699
Thhalv10029512m.g Eutrema salsugineum Thhalv10029512m.g I 0.699
orange1.1g018154m.g Citrus sinensis orange1.1g018154m.g I 0.699
POPTR_0011s04120 Populus trichocarpa POPTR_0011s04120 I 0.699
Ciclev10015729m.g Citrus clementina Ciclev10015729m.g I 0.699
mgf018114m Mimulus guttatus mgf018114m I 0.699
Bra029553 Brassica rapa Bra029553 I 0.699
Bo9g076410 Brassica oleracea Bo9g076410 I 0.699
PGSC0003DMG400022399 Solanum tuberosum PGSC0003DMG400022399 I 0.699
POPTR_0004s03310 Populus trichocarpa POPTR_0004s03310 I 0.699
VIT_00s0203g00070 Vitis vinifera VIT_00s0203g00070 I 0.699
TCM_030009 Theobroma cacao TCM_030009 I 0.699
Solyc02g079280.2 Solanum lycopersicum Solyc02g079280.2 I 0.699
Cla001360 Citrullus lanatus Cla001360 I 0.699
Gorai.009G174500 Gossypium raimondii Gorai.009G174500 I 0.699
Solyc10g005460.2 Solanum lycopersicum Solyc10g005460.2 I 0.699
Pm009892 Prunus mume Pm009892 I 0.699
Eucgr.E03819 Eucalyptus grandis Eucgr.E03819 I 0.699
Cucsa.045790 Cucumis sativus Cucsa.045790 I 0.699
PGSC0003DMG400011250 Solanum tuberosum PGSC0003DMG400011250 I 0.697
Gorai.003G183700 Gossypium raimondii Gorai.003G183700 I 0.696
VIT_11s0078g00480 Vitis vinifera VIT_11s0078g00480 I 0.696
gene30725-v1.0-hybrid Fragaria vesca gene30725-v1.0-hybrid I 0.696
chr3.CM0590.850.nc Lotus japonicus chr3.CM0590.850.nc I 0.696
SapurV1A.0028s0230 Salix purpurea SapurV1A.0028s0230 I 0.695
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.694
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.693
Lus10020085.g Linum usitatissimum Lus10020085.g I 0.693
MTR_4g091490 Medicago truncatula MTR_4g091490 I 0.692
PRUPE_ppa007438mg Prunus persica PRUPE_ppa007438mg I 0.690
Si030273m.g Setaria italica Si030273m.g I 0.690
Gorai.010G149300 Gossypium raimondii Gorai.010G149300 I 0.690
Si008086m.g Setaria italica Si008086m.g I 0.690
Sb02g036250 Sorghum bicolor Sb02g036250 I 0.690
Traes_7DS_469ED3135 Triticum aestivum Traes_7DS_469ED3135 I 0.690
GRMZM2G031323 Zea mays GRMZM2G031323 I 0.690
Pavir.Ba00668 Panicum virgatum Pavir.Ba00668 I 0.690
Pavir.Da01312 Panicum virgatum Pavir.Da01312 I 0.690
Ca_22021 Cicer arietinum Ca_22021 I 0.690
F775_06136 Aegilops tauschii F775_06136 I 0.690
BRADI1G24887 Brachypodium distachyon BRADI1G24887 I 0.690
Traes_7BS_7E91DE546 Triticum aestivum Traes_7BS_7E91DE546 I 0.690
Pavir.J38204 Panicum virgatum Pavir.J38204 I 0.690
Bostr.2983s0050 Boechera stricta Bostr.2983s0050 I 0.688
cassava40203.m1 Manihot esculenta cassava40203.m1 I 0.687
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.687
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.687
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.687
OB08G25790 Oryza brachyantha OB08G25790 I 0.687
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.687
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.687
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.687
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.687
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.687
chr2.CM0124.80.nc Lotus japonicus chr2.CM0124.80.nc I 0.687
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.687
GSMUA_Achr6G04130_001 Musa acuminata GSMUA_Achr6G04130_001 I 0.687
Gorai.004G029000 Gossypium raimondii Gorai.004G029000 I 0.685
ONIVA06G20400 Oryza nivara ONIVA06G20400 I 0.684
GSMUA_Achr6G29310_001 Musa acuminata GSMUA_Achr6G29310_001 I 0.684
OMERI07G15370 Oryza meridionalis OMERI07G15370 I 0.684
LPERR07G15930 Leersia perrieri LPERR07G15930 I 0.684
OGLUM07G18250 Oryza glumaepatula OGLUM07G18250 I 0.684
OBART07G18450 Oryza barthii OBART07G18450 I 0.684
OS07G0558100 Oryza sativa OS07G0558100 I 0.684
OPUNC07G17410 Oryza punctata OPUNC07G17410 I 0.684
ORUFI07G19200 Oryza rufipogon ORUFI07G19200 I 0.684
ORGLA07G0148800 Oryza glaberrima ORGLA07G0148800 I 0.684
GLYMA08G06440 Glycine max GLYMA08G06440 I 0.682
POPTR_0005s17080 Populus trichocarpa POPTR_0005s17080 I 0.680
SapurV1A.0966s0040 Salix purpurea SapurV1A.0966s0040 I 0.680
SapurV1A.1009s0010 Salix purpurea SapurV1A.1009s0010 I 0.680
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.679
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.679
GSMUA_Achr5G18080_001 Musa acuminata GSMUA_Achr5G18080_001 I 0.679
GLYMA04G11040 Glycine max GLYMA04G11040 I 0.678
Ciclev10003958m.g Citrus clementina Ciclev10003958m.g I 0.678
Solyc04g056310.2 Solanum lycopersicum Solyc04g056310.2 I 0.678
GLYMA06G10840 Glycine max GLYMA06G10840 I 0.678
Eucgr.I00442 Eucalyptus grandis Eucgr.I00442 I 0.678
orange1.1g037998m.g Citrus sinensis orange1.1g037998m.g I 0.678
OB06G17320 Oryza brachyantha OB06G17320 I 0.678
evm.TU.supercontig_36.134 Carica papaya evm.TU.supercontig_36.134 I 0.675
MDP0000204699 Malus domestica MDP0000204699 I 0.675
GLYMA02G13770 Glycine max GLYMA02G13770 I 0.675
SapurV1A.1088s0050 Salix purpurea SapurV1A.1088s0050 I 0.674
TCM_001102 Theobroma cacao TCM_001102 I 0.674
cassava44382.m1 Manihot esculenta cassava44382.m1 I 0.674
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I 0.674
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.674
SapurV1A.3561s0010 Salix purpurea SapurV1A.3561s0010 I 0.674
e_gw1.45.189.1 Physcomitrella patens e_gw1.45.189.1 I 0.673
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.673
GLYMA01G02070 Glycine max GLYMA01G02070 I 0.673
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.671
TCM_016552 Theobroma cacao TCM_016552 I 0.671
30054.m000809 Ricinus communis 30054.m000809 I 0.671
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.670
TCM_034902 Theobroma cacao TCM_034902 I 0.670
Traes_6AL_2BA02CAA9 Triticum aestivum Traes_6AL_2BA02CAA9 I 0.670
Traes_6DL_499F64524 Triticum aestivum Traes_6DL_499F64524 I 0.670
TRIUR3_03772 Triticum urartu TRIUR3_03772 I 0.670
Traes_6BL_5A2DB8F78 Triticum aestivum Traes_6BL_5A2DB8F78 I 0.670
Traes_6BL_0D6CD031E Triticum aestivum Traes_6BL_0D6CD031E I 0.670
MLOC_52134 Hordeum vulgare MLOC_52134 I 0.670
F775_26732 Aegilops tauschii F775_26732 I 0.670
Traes_6DL_8BF29D46C Triticum aestivum Traes_6DL_8BF29D46C I 0.670
POPTR_0013s14480 Populus trichocarpa POPTR_0013s14480 I 0.669
POPTR_0007s05360 Populus trichocarpa POPTR_0007s05360 I 0.669
GRMZM2G159547 Zea mays GRMZM2G159547 I 0.669
Sb04g027540 Sorghum bicolor Sb04g027540 I 0.669
Lus10006740.g Linum usitatissimum Lus10006740.g I 0.669
cassava41325.m1 Manihot esculenta cassava41325.m1 I 0.669
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.669
AtMYB74 Arabidopsis thaliana AT4G05100 D 0.669
SapurV1A.0048s0210 Salix purpurea SapurV1A.0048s0210 I 0.668
Bo3g162580 Brassica oleracea Bo3g162580 I 0.667
ONIVA06G08940 Oryza nivara ONIVA06G08940 I 0.667
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I 0.667
ATMYB102 Arabidopsis lyrata fgenesh2_kg.7__2173__AT4G21440.1 I 0.667
Cagra.2455s0004 Capsella grandiflora Cagra.2455s0004 I 0.667
OBART06G07710 Oryza barthii OBART06G07710 I 0.667
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I 0.667
Carubv10004873m.g Capsella rubella Carubv10004873m.g I 0.667
Bra038774 Brassica rapa Bra038774 I 0.667
Bra020892 Brassica rapa Bra020892 I 0.667
ATMYB102 Arabidopsis thaliana AT4G21440 I 0.667
OS06G0221000 Oryza sativa OS06G0221000 I 0.667
Thhalv10027571m.g Eutrema salsugineum Thhalv10027571m.g I 0.667
ORUFI06G07920 Oryza rufipogon ORUFI06G07920 I 0.667
OB02G39890 Oryza brachyantha OB02G39890 I 0.666
OBART02G32900 Oryza barthii OBART02G32900 I 0.666
Traes_2AS_FA7059723 Triticum aestivum Traes_2AS_FA7059723 I 0.666
LPERR02G26970 Leersia perrieri LPERR02G26970 I 0.666
cassava39451.m1 Manihot esculenta cassava39451.m1 I 0.666
OPUNC02G30360 Oryza punctata OPUNC02G30360 I 0.666
ORGLA02G0284500 Oryza glaberrima ORGLA02G0284500 I 0.666
ONIVA02G35050 Oryza nivara ONIVA02G35050 I 0.666
OMERI02G31500 Oryza meridionalis OMERI02G31500 I 0.666
ORUFI02G34560 Oryza rufipogon ORUFI02G34560 I 0.666
OGLUM02G33500 Oryza glumaepatula OGLUM02G33500 I 0.666
MDP0000468201 Malus domestica MDP0000468201 I 0.665
MDP0000710259 Malus domestica MDP0000710259 I 0.665
Pm015309 Prunus mume Pm015309 I 0.665
Si017785m.g Setaria italica Si017785m.g I 0.664
Bo7g107420 Brassica oleracea Bo7g107420 I 0.663
GSMUA_Achr9G12180_001 Musa acuminata GSMUA_Achr9G12180_001 I 0.663
Gorai.011G023800 Gossypium raimondii Gorai.011G023800 I 0.663
GSMUA_Achr9G24560_001 Musa acuminata GSMUA_Achr9G24560_001 I 0.663
Aquca_010_00195 Aquilegia coerulea Aquca_010_00195 I 0.661
Traes_2DS_49959692B Triticum aestivum Traes_2DS_49959692B I 0.661
Traes_2DS_49959692B1 Triticum aestivum Traes_2DS_49959692B1 I 0.661
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.661
F775_02918 Aegilops tauschii F775_02918 I 0.661