Cucsa.312940 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.312940 T284517_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.769 0.796
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.769 0.796
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.757 0.785
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.757 0.785
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.754 0.753
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.733 0.806
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.733 0.806
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.722 0.753
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.670 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.312940.1 Myb 14 61
Cucsa.312940.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

627 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cmyd_10013605 Chelonia mydas Cmyd_10013605 I 0.000
ENSCSAG00000017134 Chlorocebus sabaeus ENSCSAG00000017134 I 0.000
ENSLOCG00000014493 Lepisosteus oculatus ENSLOCG00000014493 I 0.000
ENSLOCG00000014496 Lepisosteus oculatus ENSLOCG00000014496 I 0.000
ENSLOCG00000017951 Lepisosteus oculatus ENSLOCG00000017951 I 0.000
ENSMEUG00000011159 Macropus eugenii ENSMEUG00000011159 I 0.000
ENSNLEG00000011765 Nomascus leucogenys ENSNLEG00000011765 I 0.000
ENSONIG00000002991 Oreochromis niloticus ENSONIG00000002991 I 0.000
ENSORLG00000014656 Oryzias latipes ENSORLG00000014656 I 0.000
ENSORLG00000014659 Oryzias latipes ENSORLG00000014659 I 0.000
ENSP00000300057-D1 Bos grunniens ENSP00000300057-D1 I 0.000
ENSPPYG00000006771 Pongo abelii ENSPPYG00000006771 I 0.000
ENSPPYG00000006864 Pongo abelii ENSPPYG00000006864 I 0.000
ENSSHAG00000013251 Sarcophilus harrisii ENSSHAG00000013251 I 0.000
ENSSTOG00000025753 Ictidomys tridecemlineatus ENSSTOG00000025753 I 0.000
ENSSTOG00000026434 Ictidomys tridecemlineatus ENSSTOG00000026434 I 0.000
ENSTRUG00000015316 Takifugu rubripes ENSTRUG00000015316 I 0.000
Mesp1 Rattus norvegicus ENSRNOG00000014951 I 0.000
MESP1 Procavia capensis ENSPCAG00000008272 I 0.000
MESP1 Pan troglodytes ENSPTRG00000007439 I 0.000
MESP1 Pteropus vampyrus ENSPVAG00000010571 I 0.000
MESP1 Sus scrofa ENSSSCG00000001847 I 0.000
MESP1 Felis catus ENSFCAG00000008973 I 0.000
MESP1 Homo sapiens ENSG00000166823 D 0.000
MESP1 Gorilla gorilla ENSGGOG00000014946 I 0.000
MESP1 Canis familiaris ENSCAFG00000030023 I 0.000
MESP1 Monodelphis domestica ENSMODG00000019538 I 0.000
MESP1 Loxodonta africana ENSLAFG00000022195 I 0.000
Mesp1 Mus musculus ENSMUSG00000030544 I 0.000
MESP1 Macaca mulatta ENSMMUG00000010586 I 0.000
MESP2 Tursiops truncatus ENSTTRG00000015545 I 0.000
MESP2 Callithrix jacchus ENSCJAG00000007092 I 0.000
MESP2 Bos taurus ENSBTAG00000027058 I 0.000
MESP2 Sus scrofa ENSSSCG00000001848 I 0.000
MESP2 Cavia porcellus ENSCPOG00000019717 I 0.000
MESP2 Dasypus novemcinctus ENSDNOG00000037045 I 0.000
MESP2 Otolemur garnettii ENSOGAG00000025742 I 0.000
MESP2 Monodelphis domestica ENSMODG00000024701 I 0.000
Mesp2 Mus musculus ENSMUSG00000030543 I 0.000
Mesp2 Rattus norvegicus ENSRNOG00000014925 I 0.000
mespab Danio rerio ENSDARG00000068761 I 0.000