Cucsa.352560 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.352560 T284540_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.834 0.871
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.834 0.871
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW

WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.820 0.849
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.810 0.860
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.778 0.839
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.778 0.839
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.778 0.839
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY

RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.736 0.817
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN

NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.736 0.817
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV

BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.736 0.817
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN

NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.736 0.817
F3A4.140
M11044_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.736 0.817
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.680 0.731
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.666 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.352560.1 Myb 9 55
Cucsa.352560.1 Myb 61 106

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
M7I_1578 Glarea lozoyensis M7I_1578 I 0.000
mgf024995m Mimulus guttatus mgf024995m I 0.000
Z518_04911 Rhinocladiella mackenziei Z518_04911 I 0.000
MBM_02410 Marssonina brunnea MBM_02410 I 0.000
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.000
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I 0.000
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I 0.000
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.000
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.000
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.000
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I 0.000
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I 0.000
PV05_09944 Exophiala xenobiotica PV05_09944 I 0.000
A1O1_01197 Capronia coronata A1O1_01197 I 0.000
A1O3_08778 Capronia epimyces A1O3_08778 I 0.000
A1O7_01726 Cladophialophora yegresii A1O7_01726 I 0.000
PV06_04154 Exophiala oligosperma PV06_04154 I 0.000
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.000
PV08_04655 Exophiala spinifera PV08_04655 I 0.000
F775_29723 Aegilops tauschii F775_29723 I 0.000
G647_10093 Cladophialophora carrionii G647_10093 I 0.000
PV11_09703 Exophiala sideris PV11_09703 I 0.000
Sb09g005650 Sorghum bicolor Sb09g005650 N 0.000
OGLUM05G05400 Oryza glumaepatula OGLUM05G05400 N 0.000
SSRP1-B Oryza sativa OS05G0182600 N 0.000
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.000
Si021575m.g Setaria italica Si021575m.g N 0.000
Si024096m.g Setaria italica Si024096m.g N 0.000
Si000646m.g Setaria italica Si000646m.g N 0.000
Pavir.J20558 Panicum virgatum Pavir.J20558 N 0.000
Pavir.J10741 Panicum virgatum Pavir.J10741 N 0.000
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.000
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.000
Pavir.Ca01033 Panicum virgatum Pavir.Ca01033 N 0.000
TRIUR3_14091 Triticum urartu TRIUR3_14091 N 0.000
TRAES3BF096800150CFD_g Triticum aestivum TRAES3BF096800150CFD_g N 0.000
Traes_3AS_AAAAD30B5 Triticum aestivum Traes_3AS_AAAAD30B5 N 0.000
SSRP1-A Oryza sativa OS01G0184900 N 0.000
ORUFI05G05850 Oryza rufipogon ORUFI05G05850 N 0.000
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.000
OB05G15230 Oryza brachyantha OB05G15230 N 0.000
OB01G15440 Oryza brachyantha OB01G15440 N 0.000
MLOC_6673 Hordeum vulgare MLOC_6673 N 0.000
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.000
LPERR05G04880 Leersia perrieri LPERR05G04880 N 0.000
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.000
GRMZM5G842484 Zea mays GRMZM5G842484 N 0.000
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.000
F775_28104 Aegilops tauschii F775_28104 N 0.000
BRADI2G33580 Brachypodium distachyon BRADI2G33580 N 0.000
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.000
OBART01G05540 Oryza barthii OBART01G05540 N 0.000
OBART05G05520 Oryza barthii OBART05G05520 N 0.000
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.000
ORGLA05G0049600 Oryza glaberrima ORGLA05G0049600 N 0.000
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.000
OPUNC05G05150 Oryza punctata OPUNC05G05150 N 0.000
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.000
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.000
ONIVA05G05990 Oryza nivara ONIVA05G05990 N 0.000
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.000
OMERI05G05210 Oryza meridionalis OMERI05G05210 N 0.000
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.000
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.000
OLONG_012679 Oryza longistaminata OLONG_012679 N 0.000
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.000