IGS.gm_9_00367 (Chlorella NC64A)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 IGS.gm_9_00367 T285167_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20400
M07046_2.00 		Arabidopsis thaliana
NDNNDNHNNVDDDNNNHAWRGMATATTCB
VGAATATKCYWTDNNNHHHBNNDNHNNHN		 Dap-seq
OMalley et al.(2016)
AT2G20400_col_a 		0.662 0.660
AT2G20400
M07047_2.00 		Arabidopsis thaliana
RDRGAATATTCBNWD
HWNVGAATATTCYHY		 Dap-seq
OMalley et al.(2016)
AT2G20400_colamp_a 		0.662 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
IGS.gm_9_00367 Myb 17 68

Links

Other Myb/SANT family TFs
Other Chlorella NC64A TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000269857 Malus domestica MDP0000269857 I 0.710
Cucsa.044400 Cucumis sativus Cucsa.044400 I 0.709
gene19866-v1.0-hybrid Fragaria vesca gene19866-v1.0-hybrid I 0.709
Ca_07938 Cicer arietinum Ca_07938 I 0.709
PK23608.1 Cannabis sativa PK23608.1 I 0.709
Cla014594 Citrullus lanatus Cla014594 I 0.709
GLYMA09G02030 Glycine max GLYMA09G02030 I 0.709
GLYMA15G12930 Glycine max GLYMA15G12930 I 0.709
SELMODRAFT_447259 Selaginella moellendorffii SELMODRAFT_447259 I 0.696
SELMODRAFT_438638 Selaginella moellendorffii SELMODRAFT_438638 I 0.696
MDP0000151190 Malus domestica MDP0000151190 I 0.693
POPTR_0016s00320 Populus trichocarpa POPTR_0016s00320 I 0.693
Lus10039123.g Linum usitatissimum Lus10039123.g I 0.693
Ciclev10016073m.g Citrus clementina Ciclev10016073m.g I 0.693
Gorai.010G247200 Gossypium raimondii Gorai.010G247200 I 0.693
Pm009656 Prunus mume Pm009656 I 0.693
SapurV1A.0089s0160 Salix purpurea SapurV1A.0089s0160 I 0.693
TCM_030479 Theobroma cacao TCM_030479 I 0.693
chr6.LjT02P05.130.nd Lotus japonicus chr6.LjT02P05.130.nd I 0.693
PRUPE_ppa009148mg Prunus persica PRUPE_ppa009148mg I 0.693
orange1.1g022072m.g Citrus sinensis orange1.1g022072m.g I 0.693
MTR_2g027800 Medicago truncatula MTR_2g027800 I 0.693
Lus10038735.g Linum usitatissimum Lus10038735.g I 0.693
29805.m001543 Ricinus communis 29805.m001543 I 0.672
VIT_00s0475g00030 Vitis vinifera VIT_00s0475g00030 I 0.669
GLYMA10G34050 Glycine max GLYMA10G34050 I 0.668
GLYMA20G33540 Glycine max GLYMA20G33540 I 0.668
Ca_08358 Cicer arietinum Ca_08358 I 0.668
mgf014157m Mimulus guttatus mgf014157m I 0.663
SELMODRAFT_149357 Selaginella moellendorffii SELMODRAFT_149357 I 0.662
SELMODRAFT_155847 Selaginella moellendorffii SELMODRAFT_155847 I 0.662
AT2G20400 Arabidopsis thaliana AT2G20400 D 0.662
gw1.12.332.1 Physcomitrella patens gw1.12.332.1 I 0.662
fgenesh1_pg.scaffold_27000005 Physcomitrella patens fgenesh1_pg.scaffold_27000005 I 0.662