Bostr.12659s0423 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.12659s0423 T285690_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.903 0.978
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.903 0.978
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.861 0.914
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.861 0.914
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.727 0.806
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.715 0.796
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT

ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.704 0.753
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH

DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.704 0.753
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY

RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.704 0.753
MYB24
M02311_2.00
Arabidopsis thaliana
RCCDAMYNN

NNRKTHGGY
PBM
Weirauch et al.(2014)
pTH8662
0.701 0.785
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.693 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.12659s0423.1.p Myb 20 67
Bostr.12659s0423.1.p Myb 73 118

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

548 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10009979m.g Capsella rubella Carubv10009979m.g N 0.000
estExt_gwp_gw1.C_1330066 Physcomitrella patens estExt_gwp_gw1.C_1330066 N 0.000
e_gw1.6.367.1 Physcomitrella patens e_gw1.6.367.1 N 0.000
Cucsa.321900 Cucumis sativus Cucsa.321900 N 0.000
Cucsa.318510 Cucumis sativus Cucsa.318510 N 0.000
Cucsa.313040 Cucumis sativus Cucsa.313040 N 0.000
cassava7406.valid.m1 Manihot esculenta cassava7406.valid.m1 N 0.000
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.000
cassava22380.valid.m1 Manihot esculenta cassava22380.valid.m1 N 0.000
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N 0.000
cassava15058.m1 Manihot esculenta cassava15058.m1 N 0.000
cassava13685.valid.m1 Manihot esculenta cassava13685.valid.m1 N 0.000
mgf002787m Mimulus guttatus mgf002787m N 0.000
mgf006925m Mimulus guttatus mgf006925m N 0.000
Carubv10005524m.g Capsella rubella Carubv10005524m.g N 0.000
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N 0.000
Cagra.3356s0083 Capsella grandiflora Cagra.3356s0083 N 0.000
Cagra.2281s0027 Capsella grandiflora Cagra.2281s0027 N 0.000
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N 0.000
Bostr.30275s0258 Boechera stricta Bostr.30275s0258 N 0.000
Bostr.28243s0064 Boechera stricta Bostr.28243s0064 N 0.000
Bostr.20129s0097 Boechera stricta Bostr.20129s0097 N 0.000
Aquca_095_00049 Aquilegia coerulea Aquca_095_00049 N 0.000
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.000
Aquca_005_00468 Aquilegia coerulea Aquca_005_00468 N 0.000
cassava13654.valid.m1 Manihot esculenta cassava13654.valid.m1 N 0.000
30170.m013811 Ricinus communis 30170.m013811 N 0.000
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N 0.000
TRIUR3_30366 Triticum urartu TRIUR3_30366 N 0.000
TRIUR3_25489 Triticum urartu TRIUR3_25489 N 0.000
Traes_7BL_694F67827 Triticum aestivum Traes_7BL_694F67827 N 0.000
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N 0.000
Traes_2BL_69847FCA6 Triticum aestivum Traes_2BL_69847FCA6 N 0.000
Traes_2AL_74EFA5757 Triticum aestivum Traes_2AL_74EFA5757 N 0.000
TCM_025548 Theobroma cacao TCM_025548 N 0.000
TCM_015701 Theobroma cacao TCM_015701 N 0.000
Solyc08g076860.2 Solanum lycopersicum Solyc08g076860.2 N 0.000
Solyc08g005100.2 Solanum lycopersicum Solyc08g005100.2 N 0.000
VIT_16s0039g01560 Vitis vinifera VIT_16s0039g01560 N 0.000
VIT_18s0122g00320 Vitis vinifera VIT_18s0122g00320 N 0.000
30073.m002298 Ricinus communis 30073.m002298 N 0.000
30054.m000824 Ricinus communis 30054.m000824 N 0.000
Pm023220 Prunus mume Pm023220 N 0.000
Pm022874 Prunus mume Pm022874 N 0.000
Cla016461 Citrullus lanatus Cla016461 N 0.000
Cla010408 Citrullus lanatus Cla010408 N 0.000
Cla008966 Citrullus lanatus Cla008966 N 0.000
Ca_12361 Cicer arietinum Ca_12361 N 0.000
Ca_11837 Cicer arietinum Ca_11837 N 0.000
Ca_11505 Cicer arietinum Ca_11505 N 0.000
Ca_11235 Cicer arietinum Ca_11235 N 0.000
Solyc06g061240.2 Solanum lycopersicum Solyc06g061240.2 N 0.000
Carubv10020852m.g Capsella rubella Carubv10020852m.g N 0.000
LjSGA_028172.2 Lotus japonicus LjSGA_028172.2 N 0.000
SapurV1A.1141s0070 Salix purpurea SapurV1A.1141s0070 N 0.000
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N 0.000
SapurV1A.0554s0100 Salix purpurea SapurV1A.0554s0100 N 0.000
SapurV1A.0182s0280 Salix purpurea SapurV1A.0182s0280 N 0.000
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N 0.000
SapurV1A.0016s0060 Salix purpurea SapurV1A.0016s0060 N 0.000
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N 0.000
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N 0.000
Pavir.Db00732 Panicum virgatum Pavir.Db00732 N 0.000
Pavir.Da00498 Panicum virgatum Pavir.Da00498 N 0.000
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N 0.000
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N 0.000
SapurV1A.1628s0020 Salix purpurea SapurV1A.1628s0020 N 0.000
chr3.CM0127.220.nc Lotus japonicus chr3.CM0127.220.nc N 0.000
chr1.CM0591.460.nd Lotus japonicus chr1.CM0591.460.nd N 0.000
PK20928.1 Cannabis sativa PK20928.1 N 0.000
PK14253.1 Cannabis sativa PK14253.1 N 0.000
PK10752.1 Cannabis sativa PK10752.1 N 0.000
PK01309.1 Cannabis sativa PK01309.1 N 0.000
Thhalv10026159m.g Eutrema salsugineum Thhalv10026159m.g N 0.000
Thhalv10019067m.g Eutrema salsugineum Thhalv10019067m.g N 0.000
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N 0.000
Thhalv10001013m.g Eutrema salsugineum Thhalv10001013m.g N 0.000
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N 0.000
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N 0.000
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.000
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N 0.000
Gorai.003G056500 Gossypium raimondii Gorai.003G056500 N 0.000
gene02186-v1.0-hybrid Fragaria vesca gene02186-v1.0-hybrid N 0.000
evm.TU.supercontig_71.62 Carica papaya evm.TU.supercontig_71.62 N 0.000
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N 0.000
Eucgr.F03621 Eucalyptus grandis Eucgr.F03621 N 0.000
Eucgr.F01950 Eucalyptus grandis Eucgr.F01950 N 0.000
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N 0.000
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N 0.000
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N 0.000
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.000
Gorai.004G184500 Gossypium raimondii Gorai.004G184500 N 0.000
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N 0.000
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N 0.000
orange1.1g025742m.g Citrus sinensis orange1.1g025742m.g N 0.000
MDP0000570901 Malus domestica MDP0000570901 N 0.000
MDP0000553473 Malus domestica MDP0000553473 N 0.000
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.000
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.000
Lus10023411.g Linum usitatissimum Lus10023411.g N 0.000
Lus10020337.g Linum usitatissimum Lus10020337.g N 0.000
Gorai.013G184000 Gossypium raimondii Gorai.013G184000 N 0.000
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N 0.000
Gorai.007G032400 Gossypium raimondii Gorai.007G032400 N 0.000
Ciclev10002292m.g Citrus clementina Ciclev10002292m.g N 0.000
Si017318m.g Setaria italica Si017318m.g N 0.000
GSMUA_Achr9G12280_001 Musa acuminata GSMUA_Achr9G12280_001 N 0.000
GLYMA12G01890 Glycine max GLYMA12G01890 N 0.000
GLYMA11G11640 Glycine max GLYMA11G11640 N 0.000
GLYMA11G01100 Glycine max GLYMA11G01100 N 0.000
GLYMA09G33770 Glycine max GLYMA09G33770 N 0.000
GLYMA08G36641 Glycine max GLYMA08G36641 N 0.000
GLYMA01G44430 Glycine max GLYMA01G44430 N 0.000
GLYMA01G11390 Glycine max GLYMA01G11390 N 0.000
GLYMA01G02180 Glycine max GLYMA01G02180 N 0.000
fgenesh2_kg.7__2515__AT4G17900.1 Arabidopsis lyrata fgenesh2_kg.7__2515__AT4G17900.1 N 0.000
fgenesh2_kg.2__1947__AT1G76590.1 Arabidopsis lyrata fgenesh2_kg.2__1947__AT1G76590.1 N 0.000
F775_28196 Aegilops tauschii F775_28196 N 0.000
GRMZM2G004548 Zea mays GRMZM2G004548 N 0.000
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.000
GSMUA_Achr8G14740_001 Musa acuminata GSMUA_Achr8G14740_001 N 0.000
GSMUA_Achr7G20650_001 Musa acuminata GSMUA_Achr7G20650_001 N 0.000
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N 0.000
GSMUA_Achr5G13970_001 Musa acuminata GSMUA_Achr5G13970_001 N 0.000
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N 0.000
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N 0.000
GSMUA_Achr4G19110_001 Musa acuminata GSMUA_Achr4G19110_001 N 0.000
GSMUA_Achr2G18160_001 Musa acuminata GSMUA_Achr2G18160_001 N 0.000
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N 0.000
GRMZM2G131280 Zea mays GRMZM2G131280 N 0.000
GRMZM2G091044 Zea mays GRMZM2G091044 N 0.000
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N 0.000
Bra035494 Brassica rapa Bra035494 N 0.000
Bo6g120700 Brassica oleracea Bo6g120700 N 0.000
Bo5g049240 Brassica oleracea Bo5g049240 N 0.000
Bo5g030950 Brassica oleracea Bo5g030950 N 0.000
BGIOSGA023292 Oryza indica BGIOSGA023292 N 0.000
BGIOSGA014451 Oryza indica BGIOSGA014451 N 0.000
BGIOSGA005806 Oryza indica BGIOSGA005806 N 0.000
AT1G76590 Arabidopsis thaliana AT1G76590 N 0.000
AT1G32700 Arabidopsis thaliana AT1G32700 N 0.000
AMTR_s00022p00039680 Amborella trichopoda AMTR_s00022p00039680 N 0.000
AMTR_s00008p00208550 Amborella trichopoda AMTR_s00008p00208550 N 0.000
AMTR_s00002p00211460 Amborella trichopoda AMTR_s00002p00211460 N 0.000
Bo7g059750 Brassica oleracea Bo7g059750 N 0.000
Bo7g075640 Brassica oleracea Bo7g075640 N 0.000
Bra025003 Brassica rapa Bra025003 N 0.000
Bra023280 Brassica rapa Bra023280 N 0.000
Bra021029 Brassica rapa Bra021029 N 0.000
Bra016441 Brassica rapa Bra016441 N 0.000
Bra015731 Brassica rapa Bra015731 N 0.000
Bra013266 Brassica rapa Bra013266 N 0.000
Bra012632 Brassica rapa Bra012632 N 0.000
Bra012263 Brassica rapa Bra012263 N 0.000
Bo8g070540 Brassica oleracea Bo8g070540 N 0.000
Bo8g028900 Brassica oleracea Bo8g028900 N 0.000
Bo7g105550 Brassica oleracea Bo7g105550 N 0.000
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N 0.000
LPERR02G23300 Leersia perrieri LPERR02G23300 N 0.000
Si010911m.g Setaria italica Si010911m.g N 0.000
PGSC0003DMG400017518 Solanum tuberosum PGSC0003DMG400017518 N 0.000
PGSC0003DMG400007670 Solanum tuberosum PGSC0003DMG400007670 N 0.000
OS06G0624900 Oryza sativa OS06G0624900 N 0.000
OS04G0591100 Oryza sativa OS04G0591100 N 0.000
OS02G0692700 Oryza sativa OS02G0692700 N 0.000
ORUFI06G22980 Oryza rufipogon ORUFI06G22980 N 0.000
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N 0.000
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N 0.000
ORGLA06G0177200 Oryza glaberrima ORGLA06G0177200 N 0.000
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N 0.000
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N 0.000
PGSC0003DMG400017849 Solanum tuberosum PGSC0003DMG400017849 N 0.000
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.000
Si007136m.g Setaria italica Si007136m.g N 0.000
Sb10g024575 Sorghum bicolor Sb10g024575 N 0.000
Sb06g027000 Sorghum bicolor Sb06g027000 N 0.000
Sb04g031230 Sorghum bicolor Sb04g031230 N 0.000
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N 0.000
PRUPE_ppa010445mg Prunus persica PRUPE_ppa010445mg N 0.000
POPTR_0019s07790 Populus trichocarpa POPTR_0019s07790 N 0.000
POPTR_0013s07610 Populus trichocarpa POPTR_0013s07610 N 0.000
XM_002306973.1 Populus trichocarpa POPTR_0005s28040 N 0.000
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.000
POPTR_0002s00430 Populus trichocarpa POPTR_0002s00430 N 0.000
OPUNC06G19460 Oryza punctata OPUNC06G19460 N 0.000
OPUNC04G21040 Oryza punctata OPUNC04G21040 N 0.000
OB10G26540 Oryza brachyantha OB10G26540 N 0.000
OB06G29400 Oryza brachyantha OB06G29400 N 0.000
OB04G30420 Oryza brachyantha OB04G30420 N 0.000
OB02G35810 Oryza brachyantha OB02G35810 N 0.000
MTR_8g066820 Medicago truncatula MTR_8g066820 N 0.000
MTR_5g030130 Medicago truncatula MTR_5g030130 N 0.000
MTR_5g007230 Medicago truncatula MTR_5g007230 N 0.000
MTR_4g078170 Medicago truncatula MTR_4g078170 N 0.000
MLOC_69202 Hordeum vulgare MLOC_69202 N 0.000
MLOC_63157 Hordeum vulgare MLOC_63157 N 0.000
LPERR06G17910 Leersia perrieri LPERR06G17910 N 0.000
OBART02G28660 Oryza barthii OBART02G28660 N 0.000
OBART04G23520 Oryza barthii OBART04G23520 N 0.000
OPUNC02G26310 Oryza punctata OPUNC02G26310 N 0.000
ONIVA06G25330 Oryza nivara ONIVA06G25330 N 0.000
ONIVA04G22750 Oryza nivara ONIVA04G22750 N 0.000
ONIVA02G31400 Oryza nivara ONIVA02G31400 N 0.000
OMERI01G31170 Oryza meridionalis OMERI01G31170 N 0.000
OLONG_023395 Oryza longistaminata OLONG_023395 N 0.000
OLONG_015674 Oryza longistaminata OLONG_015674 N 0.000
OGLUM06G22610 Oryza glumaepatula OGLUM06G22610 N 0.000
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N 0.000
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N 0.000
OBART06G21430 Oryza barthii OBART06G21430 N 0.000
LPERR04G19240 Leersia perrieri LPERR04G19240 N 0.000