CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.6758s0073
(
Boechera stricta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Bostr.6758s0073
T285881_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtMYB10
M07081_2.00
Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB10_col_a
0.758
0.817
AtMYB10
M07082_2.00
Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB10_colamp_a
0.758
0.817
MYB58
M07005_2.00
Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN
Dap-seq
OMalley et al.(2016)
MYB58_col_a
0.732
0.817
MYB58
M07006_2.00
Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND
Dap-seq
OMalley et al.(2016)
MYB58_colamp_a
0.732
0.817
MYB15
M07084_2.00
Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN
Dap-seq
OMalley et al.(2016)
ATY19_col_a
0.725
0.763
MYB15
M02699_2.00
Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG
SELEX
Mathelier et al.(2014)
MA0574.1
0.725
0.763
MYB15
M11041_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_01
0.725
0.763
MYB15
M11042_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_Q2
0.725
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.6758s0073.1.p
Myb
16
63
RGPWSPQEDLTLITFIQKHGHHNWRSLPKLAGLMRCGKSCRLRWINYL
Bostr.6758s0073.1.p
Myb
69
114
RGNFSKEEEDAIIHYHQTLGNKWSKIASFLPGRTDNEIKNVWNTHL
Links
Other
Myb/SANT
family TFs
Other
Boechera stricta
TFs
248 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03169
Capronia coronata
A1O1_03169
N
0.000
A1O3_01923
Capronia epimyces
A1O3_01923
N
0.000
A1O5_03527
Cladophialophora psammophila
A1O5_03527
N
0.000
A1O7_04499
Cladophialophora yegresii
A1O7_04499
N
0.000
A1O9_00937
Exophiala aquamarina
A1O9_00937
N
0.000
ARB_02044
Arthroderma benhamiae
ARB_02044
N
0.000
AUEXF2481DRAFT_43359
Aureobasidium subglaciale
AUEXF2481DRAFT_43359
N
0.000
ACLA_039280
Aspergillus clavatus
CADACLAG00003549
N
0.000
CADAFLAG00002502
Aspergillus flavus
CADAFLAG00002502
N
0.000
AFUA_3G11380
Aspergillus fumigatus
CADAFUAG00005326
N
0.000
CADANGAG00002230
Aspergillus niger
CADANGAG00002230
N
0.000
ANIA_02905
Aspergillus nidulans
CADANIAG00010184
N
0.000
CADAORAG00001291
Aspergillus oryzae
CADAORAG00001291
N
0.000
ATEG_04673
Aspergillus terreus
CADATEAG00009625
N
0.000
NFIA_065920
Neosartorya fischeri
CADNFIAG00005868
N
0.000
CIMG_03690
Coccidioides immitis
CIMG_03690
N
0.000
CPC735_005930
Coccidioides posadasii
CPC735_005930
N
0.000
EPUS_07916
Endocarpon pusillum
EPUS_07916
N
0.000
EURHEDRAFT_403202
Aspergillus ruber
EURHEDRAFT_403202
N
0.000
fgenesh1_pg.00866_#_396
Aspergillus carbonarius
fgenesh1_pg.00866_#_396
N
0.000
G647_04189
Cladophialophora carrionii
G647_04189
N
0.000
H101_05877
Trichophyton interdigitale
H101_05877
N
0.000
H102_07559
Trichophyton rubrum
H102_07559
N
0.000
H105_07586
Trichophyton soudanense
H105_07586
N
0.000
HCBG_06782
Histoplasma capsulatum
HCBG_06782
N
0.000
HMPREF1120_06729
Exophiala dermatitidis
HMPREF1120_06729
N
0.000
MCYG_00625
Microsporum canis
MCYG_00625
N
0.000
MCYG_00625
Arthroderma otae
MCYG_00625
N
0.000
MGYG_01337
Microsporum gypseum
MGYG_01337
N
0.000
MPH_12253
Macrophomina phaseolina
MPH_12253
N
0.000
OIDMADRAFT_162843
Oidiodendron maius
OIDMADRAFT_162843
N
0.000
PAAG_01959
Paracoccidioides sp lutzii
PAAG_01959
N
0.000
PABG_02226
Paracoccidioides brasiliensis
PABG_02226
N
0.000
Pc13g09650
Penicillium chrysogenum
Pc13g09650
N
0.000
PCH_Pc13g09650
Penicillium rubens
PCH_Pc13g09650
N
0.000
PDE_04763
Penicillium oxalicum
PDE_04763
N
0.000
PDIP_29650
Penicillium digitatum
PDIP_29650
N
0.000
PEX1_044080
Penicillium expansum
PEX1_044080
N
0.000
PFICI_03122
Pestalotiopsis fici
PFICI_03122
N
0.000
PITC_061280
Penicillium italicum
PITC_061280
N
0.000
PMAA_019260
Penicillium marneffei
PMAA_019260
N
0.000
PMAA_019260
Talaromyces marneffei
PMAA_019260
N
0.000
PV04_04777
Capronia semiimmersa
PV04_04777
N
0.000
PV05_01674
Exophiala xenobiotica
PV05_01674
N
0.000
PV06_04366
Exophiala oligosperma
PV06_04366
N
0.000
PV07_07563
Cladophialophora immunda
PV07_07563
N
0.000
PV08_10257
Exophiala spinifera
PV08_10257
N
0.000
PV11_05007
Exophiala sideris
PV11_05007
N
0.000
PVAR5_7731
Byssochlamys spectabilis
PVAR5_7731
N
0.000
TEQG_05494
Trichophyton equinum
TEQG_05494
N
0.000
TESG_05752
Trichophyton tonsurans
TESG_05752
N
0.000
THITE_2067650
Thielavia terrestris
THITE_2067650
N
0.000
TRV_05872
Trichophyton verrucosum
TRV_05872
N
0.000
TSTA_027260
Talaromyces stipitatus
TSTA_027260
N
0.000
U727_00433320441
Penicillium solitum
U727_00433320441
N
0.000
UREG_07450
Uncinocarpus reesii
UREG_07450
N
0.000
W97_06147
Coniosporium apollinis
W97_06147
N
0.000
Z517_11229
Fonsecaea pedrosoi
Z517_11229
N
0.000
Z518_09778
Rhinocladiella mackenziei
Z518_09778
N
0.000
Z519_09650
Cladophialophora bantiana
Z519_09650
N
0.000