CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0686s0016
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.0686s0016
T285980_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0686s0016.1.p
Myb
13
66
KQTWSTMEELLLACAVHRHGTDSWDSVADEIQKQNSTFRTLSPFECRHKYHDLK
Cagra.0686s0016.2.p
Myb
13
66
KQTWSTMEELLLACAVHRHGTDSWDSVADEIQKQNSTFRTLSPFECRHKYHDLK
Cagra.0686s0016.3.p
Myb
13
66
KQTWSTMEELLLACAVHRHGTDSWDSVADEIQKQNSTFRTLSPFECRHKYHDLK
Cagra.0686s0016.4.p
Myb
13
66
KQTWSTMEELLLACAVHRHGTDSWDSVADEIQKQNSTFRTLSPFECRHKYHDLK
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10005824m.g
Eutrema salsugineum
Thhalv10005824m.g
N
0.707
Bostr.20903s0049
Boechera stricta
Bostr.20903s0049
N
0.700
AT3G57980
Arabidopsis thaliana
AT3G57980
N
0.700
Bra016893
Brassica rapa
Bra016893
N
0.699
AT2G42150
Arabidopsis thaliana
AT2G42150
N
0.699