CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.3262s0018
(
Capsella grandiflora
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cagra.3262s0018
T286109_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.3262s0018.1.p
Myb
396
443
NGPWTVAEDNDIRLIAQNKGITDWLDIAVSLGTNRTPFHCLARYQRSL
Cagra.3262s0018.1.p
Myb
449
495
RKEWTAEEDDQLRAAVDLFGETDWQSVANVLQGRTGPQCSNRWKKSL
Cagra.3262s0018.1.p
Myb
502
548
KQKWSSEEDKRLKVAVTLFGTKNWPKIAQFVPGRTGTQCLERWGNSL
Cagra.3262s0018.1.p
Myb
554
599
FGKWTKEEDAKLREAMKEHGHCWSKVASYMSGRTDSQCAKRWKSLY
Links
Other
Myb/SANT
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10006404m.g
Capsella rubella
Carubv10006404m.g
N
0.854