Carubv10027619m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10027619m.g T286465_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB80
M07142_2.00
Arabidopsis thaliana
NYYYACCTAMYWHNN

NNDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MS188_col_a
0.909 1.000
MYB80
M07143_2.00
Arabidopsis thaliana
YYYACCTAMYTWNNN

NNNWARKTAGGTRRR
Dap-seq
OMalley et al.(2016)
MS188_colamp_a
0.909 1.000
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027619m Myb 14 61
Carubv10027619m Myb 67 112

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.4959 Candida albicans CaO19.4959 N 0.000
G210_3674 Candida maltosa G210_3674 N 0.000
CANTEDRAFT_112521 Candida tenuis CANTEDRAFT_112521 N 0.000
CTRG_03606 Candida tropicalis CTRG_03606 N 0.000
DEHA2E16434g Debaryomyces hansenii DEHA2E16434g N 0.000