Ciclev10023519m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10023519m.g T286631_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10023519m Myb 11 46

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_15745 Aegilops tauschii F775_15745 N 0.711
F775_42755 Aegilops tauschii F775_42755 N 0.664
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.815
AMTR_s00057p00069720 Amborella trichopoda AMTR_s00057p00069720 N 0.668
AMTR_s00133p00075670 Amborella trichopoda AMTR_s00133p00075670 N 0.756
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.732
ATY13 Arabidopsis thaliana AT1G74650 D 0.665
MYB95 Arabidopsis thaliana AT1G74430 N 0.760
MYB3 Arabidopsis thaliana AT1G22640 D 0.817
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.667
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.728
Bo8g104180 Brassica oleracea Bo8g104180 N 0.662
Bo4g198650 Brassica oleracea Bo4g198650 N 0.675
PK00358.1 Cannabis sativa PK00358.1 N 0.693
PK21717.1 Cannabis sativa PK21717.1 N 0.670
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.717
Cagra.7160s0001 Capsella grandiflora Cagra.7160s0001 N 0.712
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.721
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.808
Ca_10215 Cicer arietinum Ca_10215 N 0.678
EMIHUDRAFT_256335 Emiliania huxleyi EMIHUDRAFT_256335 N 0.680
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.690
gene24516-v1.0-hybrid Fragaria vesca gene24516-v1.0-hybrid N 0.718
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.749
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.732
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.780
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.670
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I 0.755
MLOC_68511 Hordeum vulgare MLOC_68511 I 0.665
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.758
MLOC_59184 Hordeum vulgare MLOC_59184 N 0.745
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.717
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.746
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.743
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.767
chr5.CM0071.390.nd Lotus japonicus chr5.CM0071.390.nd N 0.710
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.749
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.699
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.703
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.694
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.706
MDP0000911051 Malus domestica MDP0000911051 N 0.808
MDP0000119369 Malus domestica MDP0000119369 N 0.702
cassava2659.m1 Manihot esculenta cassava2659.m1 N 0.707
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.720
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.757
MTR_1g087540 Medicago truncatula MTR_1g087540 N 0.731
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.710
mgf025944m Mimulus guttatus mgf025944m N 0.707
mg021480m Mimulus guttatus mg021480m N 0.825
mgf020736m Mimulus guttatus mgf020736m N 0.712
mgf023771m Mimulus guttatus mgf023771m N 0.768
OB06G28240 Oryza brachyantha OB06G28240 N 0.690
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.721
BGIOSGA010548 Oryza indica BGIOSGA010548 N 0.760
OLONG_005719 Oryza longistaminata OLONG_005719 N 0.667
OLONG_000602 Oryza longistaminata OLONG_000602 N 0.679
ORUFI03G21770 Oryza rufipogon ORUFI03G21770 N 0.671
OS01G0685400 Oryza sativa OS01G0685400 N 0.678
OS04G0517100 Oryza sativa OS04G0517100 N 0.864
OS12G0515300 Oryza sativa OS12G0515300 N 0.691
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.749
Pavir.J25377 Panicum virgatum Pavir.J25377 N 0.664
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.749
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.702
Pavir.J06554 Panicum virgatum Pavir.J06554 N 0.712
PDK_20s1405001g001 Phoenix dactylifera PDK_20s1405001g001 N 0.661
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.721
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.808
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.696
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.707
Pm015551 Prunus mume Pm015551 N 0.731
Pm000007 Prunus mume Pm000007 N 0.707
29212.m000177 Ricinus communis 29212.m000177 N 0.711
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I 0.755
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.775
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N 0.678
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.668
PGSC0003DMG400004610 Solanum tuberosum PGSC0003DMG400004610 N 0.702
TCM_041010 Theobroma cacao TCM_041010 I 0.690
Traes_1BL_A44464337 Triticum aestivum Traes_1BL_A44464337 N 0.740
Traes_4BL_61E35C455 Triticum aestivum Traes_4BL_61E35C455 N 0.725
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N 0.689
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.681
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.722
Traes_5AS_D238844BB Triticum aestivum Traes_5AS_D238844BB N 0.840
GRMZM2G449056 Zea mays GRMZM2G449056 N 0.663
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.841
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.823