Eucgr.H02896 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.H02896 T286910_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.737 0.806
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.692 0.710
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.692 0.710
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.691 0.699
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.678 0.688
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.678 0.688
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN

NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.673 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.H02896.1 Myb 23 70
Eucgr.H02896.1 Myb 76 121

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

591 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
4144_YDR207C Saccharomyces mikatae 4144_YDR207C I 0.000
4486_YDR207C Saccharomyces bayanus 4486_YDR207C I 0.000
4509_YDR207C Saccharomyces paradoxus 4509_YDR207C I 0.000
AACERI_AaceriAGL099C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL099C I 0.000
AGOS_AGL099C Ashbya gossypii AGOS_AGL099C I 0.000
CAGL0F05357g Candida glabrata CAGL0F05357g I 0.000
Ecym_4153 Eremothecium cymbalariae Ecym_4153 I 0.000
KLLA0_F20680g Kluyveromyces lactis KLLA0_F20680g I 0.000
KLTH0F08074g Lachancea thermotolerans KLTH0F08074g I 0.000
KLTH0F08074g Kluyveromyces thermotolerans KLTH0F08074g I 0.000
Kwal_3178 Kluyveromyces waltii Kwal_3178 I 0.000
NDAI_0C04790 Naumovozyma dairenensis NDAI_0C04790 I 0.000
SAKL0H13266g Lachancea kluyveri SAKL0H13266g I 0.000
SU7_2610 Saccharomyces arboricola SU7_2610 I 0.000
TBLA_0H00720 Tetrapisispora blattae TBLA_0H00720 I 0.000
TDEL_0F05400 Torulaspora delbrueckii TDEL_0F05400 I 0.000
UME6 Saccharomyces cerevisiae YDR207C D 0.000
ZBAI_01674 Zygosaccharomyces bailii ZBAI_01674 I 0.000