CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene30456-v1.0-hybrid
(
Fragaria vesca
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
gene30456-v1.0-hybrid
T287409_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna30456.1-v1.0-hybrid
Myb
8
61
QSRWGTWLELLLAGAVTRYGTRDWTLVSAELRARTVCPYAFTPEVCKAKYEDLR
Links
Other
Myb/SANT
family TFs
Other
Fragaria vesca
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa005047mg
Prunus persica
PRUPE_ppa005047mg
N
0.808
Cla019762
Citrullus lanatus
Cla019762
N
0.805
TCM_029951
Theobroma cacao
TCM_029951
N
0.785
MTR_2g012600
Medicago truncatula
MTR_2g012600
N
0.748
Bo1g098000
Brassica oleracea
Bo1g098000
N
0.748
SapurV1A.2246s0010
Salix purpurea
SapurV1A.2246s0010
N
0.743
SapurV1A.0299s0230
Salix purpurea
SapurV1A.0299s0230
N
0.743
MTR_4g090460
Medicago truncatula
MTR_4g090460
N
0.729
Ciclev10015122m.g
Citrus clementina
Ciclev10015122m.g
N
0.722
orange1.1g012054m.g
Citrus sinensis
orange1.1g012054m.g
N
0.722
Thhalv10023448m.g
Eutrema salsugineum
Thhalv10023448m.g
N
0.714
GLYMA15G07500
Glycine max
GLYMA15G07500
N
0.701
Ca_19661
Cicer arietinum
Ca_19661
N
0.695
PK07851.1
Cannabis sativa
PK07851.1
N
0.678