CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.001G024300
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.001G024300
T287446_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.776
0.806
RAX3
M11043_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.776
0.806
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.001G024300.1
Myb
14
62
RGPWSPEEDATLKNYVQSHGTGGNWIALPLKAGLKRCGKSCRLRWLNYL
Gorai.001G024300.1
Myb
68
113
HGGFTEEEDNIICSLYSQMGSRWSLIASQLPGRTDNDVKNYWNTKL
Gorai.001G024300.2
Myb
14
62
RGPWSPEEDATLKNYVQSHGTGGNWIALPLKAGLKRCGKSCRLRWLNYL
Gorai.001G024300.2
Myb
68
113
HGGFTEEEDNIICSLYSQMGSRWSLIASQLPGRTDNDVKNYWNTKL
Gorai.001G024300.3
Myb
45
81
PKRKTTLYALFIVKWEAASQLPGRTDNDVKNYWNTKL
Gorai.001G024300.4
Myb
1
28
MGSRWSLIASQLPGRTDNDVKNYWNTKL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
545 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy