Gorai.004G226000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.004G226000 T287553_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G226000.1 Myb 1106 1156
Gorai.004G226000.2 Myb 1105 1155
Gorai.004G226000.3 Myb 1105 1155
Gorai.004G226000.4 Myb 1105 1155
Gorai.004G226000.8 Myb 1105 1155

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK23540.1 Cannabis sativa PK23540.1 N 0.896
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.855
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.855
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.855
MDP0000155726 Malus domestica MDP0000155726 N 0.855
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.855
MDP0000250529 Malus domestica MDP0000250529 N 0.855
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.855
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.855
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.851
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.845
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.845
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.845
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.843
Cla015187 Citrullus lanatus Cla015187 N 0.843
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.833
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.833
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.833
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.832
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.832
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.831
Pm020347 Prunus mume Pm020347 N 0.831
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.829
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.824
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.822
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.822
TCM_002924 Theobroma cacao TCM_002924 N 0.822
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.814
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.812
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.810
EAF1B Arabidopsis thaliana AT3G24870 N 0.810
EAF1A Arabidopsis thaliana AT3G24880 N 0.810
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.802
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.802
30204.m001750 Ricinus communis 30204.m001750 N 0.802
Bo7g031610 Brassica oleracea Bo7g031610 N 0.789
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.788
Carubv10015863m.g Capsella rubella Carubv10015863m.g N 0.785
Bo3g083740 Brassica oleracea Bo3g083740 N 0.778
Bra013238 Brassica rapa Bra013238 N 0.778
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.773
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.763
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.757
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.746
Gorai.001G233800 Gossypium raimondii Gorai.001G233800 N 0.742
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.738
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.735
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.734
Carubv10016123m.g Capsella rubella Carubv10016123m.g N 0.732
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N 0.731
Pavir.J18859 Panicum virgatum Pavir.J18859 N 0.716
Si000015m.g Setaria italica Si000015m.g N 0.716
Sb03g025920 Sorghum bicolor Sb03g025920 N 0.716
Bra032689 Brassica rapa Bra032689 N 0.698
Bo4g133290 Brassica oleracea Bo4g133290 N 0.698
OLONG_015531 Oryza longistaminata OLONG_015531 N 0.694
OGLUM08G04910 Oryza glumaepatula OGLUM08G04910 N 0.694
BGIOSGA027556 Oryza indica BGIOSGA027556 N 0.694
OB01G30180 Oryza brachyantha OB01G30180 N 0.694
OBART08G04660 Oryza barthii OBART08G04660 N 0.694
ORUFI08G05170 Oryza rufipogon ORUFI08G05170 N 0.694
OMERI08G04670 Oryza meridionalis OMERI08G04670 N 0.694
OPUNC08G04510 Oryza punctata OPUNC08G04510 N 0.694
OS08G0177300 Oryza sativa OS08G0177300 N 0.694
ONIVA08G04510 Oryza nivara ONIVA08G04510 N 0.694
fgenesh1_pg.scaffold_87000060 Physcomitrella patens fgenesh1_pg.scaffold_87000060 N 0.674
TRIUR3_27363 Triticum urartu TRIUR3_27363 N 0.661
BRADI2G41720 Brachypodium distachyon BRADI2G41720 N 0.661
LPERR11G18970 Leersia perrieri LPERR11G18970 N 0.661
F775_03250 Aegilops tauschii F775_03250 N 0.661