Lus10015376.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10015376.g T287983_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.750 0.910
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.662 0.756
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.662 0.756
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10015376 Myb 2 34
Lus10015376 Myb 40 85

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYB106 Arabidopsis thaliana AT3G01140 D 0.750
MYB107 Arabidopsis thaliana AT3G02940 D 0.662
Ciclev10011948m.g Citrus clementina Ciclev10011948m.g I 0.767
Aquca_002_00671 Aquilegia coerulea Aquca_002_00671 I 0.844
mgf016794m Mimulus guttatus mgf016794m I 0.727
mgf014886m Mimulus guttatus mgf014886m I 0.702
e_gw1.389.9.1 Physcomitrella patens e_gw1.389.9.1 I 0.667
e_gw1.326.5.1 Physcomitrella patens e_gw1.326.5.1 I 0.664
e_gw1.106.133.1 Physcomitrella patens e_gw1.106.133.1 I 0.664
Cucsa.338590 Cucumis sativus Cucsa.338590 I 0.708
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.759
cassava3811.m1 Manihot esculenta cassava3811.m1 I 0.713
cassava360.valid.m1 Manihot esculenta cassava360.valid.m1 I 0.755
Bostr.1460s0105 Boechera stricta Bostr.1460s0105 I 0.741
Bostr.19046s0006 Boechera stricta Bostr.19046s0006 I 0.662
Carubv10016434m.g Capsella rubella Carubv10016434m.g I 0.662
Carubv10013887m.g Capsella rubella Carubv10013887m.g I 0.750
Carubv10002573m.g Capsella rubella Carubv10002573m.g I 0.663
Carubv10001433m.g Capsella rubella Carubv10001433m.g I 0.761
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.750
Cagra.1194s0007 Capsella grandiflora Cagra.1194s0007 I 0.662
Cagra.1036s0022 Capsella grandiflora Cagra.1036s0022 I 0.761
Cagra.0434s0044 Capsella grandiflora Cagra.0434s0044 I 0.663
Bostr.2902s0269 Boechera stricta Bostr.2902s0269 I 0.761
Bostr.2618s0017 Boechera stricta Bostr.2618s0017 I 0.663
cassava20416.m1 Manihot esculenta cassava20416.m1 I 0.713
cassava1759.valid.m1 Manihot esculenta cassava1759.valid.m1 I 0.767
VIT_14s0108g01080 Vitis vinifera VIT_14s0108g01080 I 0.771
VIT_01s0026g02770 Vitis vinifera VIT_01s0026g02770 I 0.767
TRIUR3_25784 Triticum urartu TRIUR3_25784 I 0.689
TRIUR3_17294 Triticum urartu TRIUR3_17294 I 0.661
TRIUR3_01098 Triticum urartu TRIUR3_01098 I 0.785
Traes_7DS_91CCCF6DB Triticum aestivum Traes_7DS_91CCCF6DB I 0.664
Traes_7DS_91CCCF6DB1 Triticum aestivum Traes_7DS_91CCCF6DB1 I 0.664
Traes_4DL_4EE7DFCCD Triticum aestivum Traes_4DL_4EE7DFCCD I 0.664
Traes_4AL_9BF07972C Triticum aestivum Traes_4AL_9BF07972C I 0.664
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I 0.689
VIT_17s0000g06410 Vitis vinifera VIT_17s0000g06410 I 0.752
Ca_10504 Cicer arietinum Ca_10504 I 0.771
Pm024886 Prunus mume Pm024886 I 0.694
Pm019588 Prunus mume Pm019588 I 0.661
Pm015916 Prunus mume Pm015916 I 0.767
Pm006464 Prunus mume Pm006464 I 0.712
Pm004557 Prunus mume Pm004557 I 0.687
Cla017248 Citrullus lanatus Cla017248 I 0.686
Cla016484 Citrullus lanatus Cla016484 I 0.684
Cla010483 Citrullus lanatus Cla010483 I 0.759
Ca_27606 Cicer arietinum Ca_27606 I 0.752
Ca_22367 Cicer arietinum Ca_22367 I 0.765
Traes_2DL_BDECC07BD Triticum aestivum Traes_2DL_BDECC07BD I 0.785
LjSGA_020545.1 Lotus japonicus LjSGA_020545.1 I 0.767
SapurV1A.0063s0570 Salix purpurea SapurV1A.0063s0570 I 0.767
Pavir.J33881 Panicum virgatum Pavir.J33881 I 0.767
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.767
Pavir.Ab02021 Panicum virgatum Pavir.Ab02021 I 0.683
orange1.1g047101m.g Citrus sinensis orange1.1g047101m.g I 0.703
orange1.1g039016m.g Citrus sinensis orange1.1g039016m.g I 0.721
orange1.1g016708m.g Citrus sinensis orange1.1g016708m.g I 0.767
MDP0000868578 Malus domestica MDP0000868578 I 0.684
MDP0000742771 Malus domestica MDP0000742771 I 0.767
MDP0000716457 Malus domestica MDP0000716457 I 0.729
SapurV1A.0302s0210 Salix purpurea SapurV1A.0302s0210 I 0.750
SapurV1A.0438s0010 Salix purpurea SapurV1A.0438s0010 I 0.767
chr1.CM0141.320.nc Lotus japonicus chr1.CM0141.320.nc I 0.775
PK26207.1 Cannabis sativa PK26207.1 I 0.737
PK22137.1 Cannabis sativa PK22137.1 I 0.767
PK18231.1 Cannabis sativa PK18231.1 I 0.668
Thhalv10022405m.g Eutrema salsugineum Thhalv10022405m.g I 0.662
Thhalv10021048m.g Eutrema salsugineum Thhalv10021048m.g I 0.720
Thhalv10014101m.g Eutrema salsugineum Thhalv10014101m.g I 0.761
Thhalv10014050m.g Eutrema salsugineum Thhalv10014050m.g I 0.663
SapurV1A.3756s0010 Salix purpurea SapurV1A.3756s0010 I 0.750
SapurV1A.0801s0120 Salix purpurea SapurV1A.0801s0120 I 0.733
MDP0000298505 Malus domestica MDP0000298505 I 0.684
MDP0000278681 Malus domestica MDP0000278681 I 0.767
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I 0.677
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I 0.683
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.683
gene30024-v1.0-hybrid Fragaria vesca gene30024-v1.0-hybrid I 0.721
gene26045-v1.0-hybrid Fragaria vesca gene26045-v1.0-hybrid I 0.687
gene26044-v1.0-hybrid Fragaria vesca gene26044-v1.0-hybrid I 0.691
gene04423-v1.0-hybrid Fragaria vesca gene04423-v1.0-hybrid I 0.767
evm.TU.supercontig_14.102 Carica papaya evm.TU.supercontig_14.102 I 0.767
Eucgr.J01362 Eucalyptus grandis Eucgr.J01362 I 0.771
Ciclev10033327m.g Citrus clementina Ciclev10033327m.g I 0.721
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.750
Gorai.012G052500 Gossypium raimondii Gorai.012G052500 I 0.722
MDP0000274301 Malus domestica MDP0000274301 I 0.767
MDP0000204699 Malus domestica MDP0000204699 I 0.719
MDP0000136874 Malus domestica MDP0000136874 I 0.684
MDP0000121476 Malus domestica MDP0000121476 I 0.767
Lus10033003.g Linum usitatissimum Lus10033003.g I 0.771
Lus10026620.g Linum usitatissimum Lus10026620.g I 0.724
Lus10019086.g Linum usitatissimum Lus10019086.g I 0.714
Lus10015712.g Linum usitatissimum Lus10015712.g I 0.714
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I 0.721
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.725
Ciclev10023440m.g Citrus clementina Ciclev10023440m.g I 0.703
Traes_2BL_230A3A2D0 Triticum aestivum Traes_2BL_230A3A2D0 I 0.785
MTR_4g082230 Medicago truncatula MTR_4g082230 I 0.736
GLYMA19G02890 Glycine max GLYMA19G02890 I 0.757
GLYMA18G49630 Glycine max GLYMA18G49630 I 0.750
GLYMA13G05550 Glycine max GLYMA13G05550 I 0.767
GLYMA09G37040 Glycine max GLYMA09G37040 I 0.750
GLYMA07G35561 Glycine max GLYMA07G35561 I 0.754
GLYMA02G12266 Glycine max GLYMA02G12266 I 0.716
AtMYB9 Arabidopsis lyrata fgenesh2_kg.6__1669__AT5G16770.1 I 0.663
ATMYB16 Arabidopsis lyrata fgenesh2_kg.6__1513__AT5G15310.1 I 0.761
MYB107 Arabidopsis lyrata fgenesh2_kg.3__241__AT3G02940.1 I 0.662
MYB106 Arabidopsis lyrata fgenesh2_kg.3__117__AT3G01140.1 I 0.750
GLYMA20G04240 Glycine max GLYMA20G04240 I 0.754
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.717
MLOC_58915 Hordeum vulgare MLOC_58915 I 0.785
LPERR08G12960 Leersia perrieri LPERR08G12960 I 0.771
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I 0.721
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I 0.721
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I 0.677
GSMUA_Achr10G29680_001 Musa acuminata GSMUA_Achr10G29680_001 I 0.691
GRMZM2G111117 Zea mays GRMZM2G111117 I 0.759
GRMZM2G102790 Zea mays GRMZM2G102790 I 0.661
GRMZM2G079123 Zea mays GRMZM2G079123 I 0.761
GRMZM2G032655 Zea mays GRMZM2G032655 I 0.689
F775_26161 Aegilops tauschii F775_26161 I 0.689
F775_14942 Aegilops tauschii F775_14942 I 0.664
Bo5g156410 Brassica oleracea Bo5g156410 I 0.750
Bo3g010230 Brassica oleracea Bo3g010230 I 0.761
Bo2g012520 Brassica oleracea Bo2g012520 I 0.717
Bo1g157620 Brassica oleracea Bo1g157620 I 0.750
Bo1g155040 Brassica oleracea Bo1g155040 I 0.662
BGIOSGA026935 Oryza indica BGIOSGA026935 I 0.771
BGIOSGA016547 Oryza indica BGIOSGA016547 I 0.693
BGIOSGA008493 Oryza indica BGIOSGA008493 I 0.683
AtMYB9 Arabidopsis thaliana AT5G16770 I 0.663
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.761
Bo9g164230 Brassica oleracea Bo9g164230 I 0.761
Bra006296 Brassica rapa Bra006296 I 0.717
F775_12009 Aegilops tauschii F775_12009 I 0.785
F775_04867 Aegilops tauschii F775_04867 I 0.661
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I 0.689
BRADI3G36660 Brachypodium distachyon BRADI3G36660 I 0.763
Bra039142 Brassica rapa Bra039142 I 0.750
Bra032028 Brassica rapa Bra032028 I 0.662
Bra023515 Brassica rapa Bra023515 I 0.761
Bra021483 Brassica rapa Bra021483 I 0.750
Bra021382 Brassica rapa Bra021382 I 0.662
Bra008705 Brassica rapa Bra008705 I 0.761
AMTR_s00010p00267100 Amborella trichopoda AMTR_s00010p00267100 I 0.755
Traes_2AL_097BADCFE Triticum aestivum Traes_2AL_097BADCFE I 0.785
PRUPE_ppa026006mg Prunus persica PRUPE_ppa026006mg I 0.687
PRUPE_ppa023143mg Prunus persica PRUPE_ppa023143mg I 0.694
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.661
PRUPE_ppa006769mg Prunus persica PRUPE_ppa006769mg I 0.767
POPTR_0017s12230 Populus trichocarpa POPTR_0017s12230 I 0.767
POPTR_0010s17300 Populus trichocarpa POPTR_0010s17300 I 0.767
POPTR_0008s08920 Populus trichocarpa POPTR_0008s08920 I 0.737
POPTR_0008s08870 Populus trichocarpa POPTR_0008s08870 I 0.742
PGSC0003DMG400024299 Solanum tuberosum PGSC0003DMG400024299 I 0.669
PGSC0003DMG400006408 Solanum tuberosum PGSC0003DMG400006408 I 0.677
Sb04g024000 Sorghum bicolor Sb04g024000 I 0.683
Sb07g021210 Sorghum bicolor Sb07g021210 I 0.761
TCM_018639 Theobroma cacao TCM_018639 I 0.767
TCM_011660 Theobroma cacao TCM_011660 I 0.692
TCM_011659 Theobroma cacao TCM_011659 I 0.755
TCM_001102 Theobroma cacao TCM_001102 I 0.683
Solyc04g074170.1 Solanum lycopersicum Solyc04g074170.1 I 0.677
Solyc02g088190.2 Solanum lycopersicum Solyc02g088190.2 I 0.787
Solyc01g010910.1 Solanum lycopersicum Solyc01g010910.1 I 0.669
Si017851m.g Setaria italica Si017851m.g I 0.683
Si013994m.g Setaria italica Si013994m.g I 0.767
Si010352m.g Setaria italica Si010352m.g I 0.689
PGSC0003DMG400001339 Solanum tuberosum PGSC0003DMG400001339 I 0.767
OS04G0461000 Oryza sativa OS04G0461000 I 0.693
OGLUM08G16450 Oryza glumaepatula OGLUM08G16450 I 0.771
OGLUM02G22040 Oryza glumaepatula OGLUM02G22040 I 0.683
OBART08G15700 Oryza barthii OBART08G15700 I 0.771
OBART04G14990 Oryza barthii OBART04G14990 I 0.693
OBART02G21860 Oryza barthii OBART02G21860 I 0.683
OB08G23170 Oryza brachyantha OB08G23170 I 0.767
OB04G22310 Oryza brachyantha OB04G22310 I 0.693
OB02G29290 Oryza brachyantha OB02G29290 I 0.683
MTR_7g011170 Medicago truncatula MTR_7g011170 I 0.705
MTR_6g012690 Medicago truncatula MTR_6g012690 I 0.767
OLONG_004507 Oryza longistaminata OLONG_004507 I 0.771
OMERI02G21400 Oryza meridionalis OMERI02G21400 I 0.683
ORUFI08G17610 Oryza rufipogon ORUFI08G17610 I 0.771
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I 0.693
ORUFI02G22940 Oryza rufipogon ORUFI02G22940 I 0.683
ORGLA08G0137800 Oryza glaberrima ORGLA08G0137800 I 0.771
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I 0.693
OPUNC08G13770 Oryza punctata OPUNC08G13770 I 0.771
ONIVA08G16810 Oryza nivara ONIVA08G16810 I 0.771
ONIVA04G13130 Oryza nivara ONIVA04G13130 I 0.693
ONIVA02G24090 Oryza nivara ONIVA02G24090 I 0.683
OMERI08G12990 Oryza meridionalis OMERI08G12990 I 0.771
MTR_4g082290 Medicago truncatula MTR_4g082290 I 0.748