Lus10040139.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10040139.g T288229_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW

WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.669 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10040139 Myb 18 65
Lus10040139 Myb 71 116

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.000
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.000
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.000
Bo8g068060 Brassica oleracea Bo8g068060 I 0.000
Bo8g104060 Brassica oleracea Bo8g104060 I 0.000
Bra016544 Brassica rapa Bra016544 I 0.000
Bra025685 Brassica rapa Bra025685 I 0.000
Bra031049 Brassica rapa Bra031049 I 0.000
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.000
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.000
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.000
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.000
F775_13266 Aegilops tauschii F775_13266 I 0.000
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.000
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.000
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.000
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.000
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.000
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.000
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.000
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.000
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.000
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.000
MDP0000193129 Malus domestica MDP0000193129 I 0.000
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.000
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.000
OBART11G21780 Oryza barthii OBART11G21780 N 0.000
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.000
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.000
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.000
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.000
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.000
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.000
OS11G0658700 Oryza sativa OS11G0658700 N 0.000
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.000
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.000
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.000
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.000
Pm024895 Prunus mume Pm024895 I 0.000
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.000
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.000
Si028357m.g Setaria italica Si028357m.g N 0.000
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.000
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.000
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.000
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.000
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.000