MDP0000149535 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000149535 T288326_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.889 0.957
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.889 0.957
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.875 0.957
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.868 0.946
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.868 0.946
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.858 0.957
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.858 0.957
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.850 0.946
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.850 0.946
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000149535 Myb 14 61
MDP0000149535 Myb 67 112

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.000
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.000
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.000
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.000
GATA21 Arabidopsis thaliana AT5G56860 N 0.000
GATA22 Arabidopsis thaliana AT4G26150 N 0.000
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.000
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.000
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.000
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.000
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I 0.000
Bo7g110740 Brassica oleracea Bo7g110740 N 0.000
Bo3g019610 Brassica oleracea Bo3g019610 I 0.000
Bo2g033970 Brassica oleracea Bo2g033970 N 0.000
Bo1g042950 Brassica oleracea Bo1g042950 N 0.000
Bo9g127360 Brassica oleracea Bo9g127360 N 0.000
Bra035633 Brassica rapa Bra035633 N 0.000
Bra026461 Brassica rapa Bra026461 N 0.000
Bra019118 Brassica rapa Bra019118 N 0.000
Bra006851 Brassica rapa Bra006851 I 0.000
Bra002788 Brassica rapa Bra002788 N 0.000
PK07593.1 Cannabis sativa PK07593.1 N 0.000
PK21934.1 Cannabis sativa PK21934.1 I 0.000
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.000
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.000
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.000
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.000
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.000
Cla021191 Citrullus lanatus Cla021191 N 0.000
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.000
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.000
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.000
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.000
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.000
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.000
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.000
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.000
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.000
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.000
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.000
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.000
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.000
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.000
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.000
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.000
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.000
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.000
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.000
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.000
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.000
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.000
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.000
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.000
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.000
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.000
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.000
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.000
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.000
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.000
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.000
MDP0000739900 Malus domestica MDP0000739900 N 0.000
MDP0000131803 Malus domestica MDP0000131803 N 0.000
MDP0000190038 Malus domestica MDP0000190038 N 0.000
MDP0000237740 Malus domestica MDP0000237740 N 0.000
MDP0000309902 Malus domestica MDP0000309902 I 0.000
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.000
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.000
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.000
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.000
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.000
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.000
mgf008387m Mimulus guttatus mgf008387m N 0.000
mgf025842m Mimulus guttatus mgf025842m N 0.000
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I 0.000
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.000
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.000
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.000
GSMUA_Achr8G33850_001 Musa acuminata GSMUA_Achr8G33850_001 N 0.000
GSMUA_Achr2G16730_001 Musa acuminata GSMUA_Achr2G16730_001 I 0.000
OBART02G08990 Oryza barthii OBART02G08990 N 0.000
OBART06G19060 Oryza barthii OBART06G19060 N 0.000
OB02G18010 Oryza brachyantha OB02G18010 N 0.000
OB06G26630 Oryza brachyantha OB06G26630 N 0.000
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.000
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.000
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.000
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.000
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.000
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.000
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.000
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.000
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.000
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.000
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.000
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.000
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.000
OS02G0220400 Oryza sativa OS02G0220400 N 0.000
OS06G0571800 Oryza sativa OS06G0571800 N 0.000
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.000
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.000
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.000
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.000
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.000
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.000
Pm005502 Prunus mume Pm005502 N 0.000
Pm027164 Prunus mume Pm027164 N 0.000
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.000
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.000
29912.m005322 Ricinus communis 29912.m005322 N 0.000
29794.m003323 Ricinus communis 29794.m003323 N 0.000
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.000
Si006733m.g Setaria italica Si006733m.g N 0.000
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.000
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.000
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.000
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.000
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.000
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.000
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.000
TCM_037666 Theobroma cacao TCM_037666 N 0.000
TCM_037285 Theobroma cacao TCM_037285 N 0.000
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.000
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.000
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.000
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.000
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.000
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.000
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.000
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.000
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.000
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.000