MDP0000555913 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000555913 T288644_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000555913 Myb 164 210
MDP0000555913 Myb 216 261

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.000
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.000
LBD16 Arabidopsis thaliana AT2G42430 D 0.000
LBD20 Arabidopsis thaliana AT3G03760 I 0.000
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.000
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.000
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.000
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.000
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.000
Cla002965 Citrullus lanatus Cla002965 I 0.000
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.000
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.000
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.000
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.000
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.000
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.000
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.000
MDP0000322059 Malus domestica MDP0000322059 I 0.000
MDP0000254224 Malus domestica MDP0000254224 I 0.000
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.000
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.000
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.000
OBART03G10450 Oryza barthii OBART03G10450 I 0.000
OB03G20590 Oryza brachyantha OB03G20590 I 0.000
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.000
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.000
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.000
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.000
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.000
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.000
OS03G0246900 Oryza sativa OS03G0246900 I 0.000
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.000
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.000
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.000
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I 0.000
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.000
Pm028642 Prunus mume Pm028642 I 0.000
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.000
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.000
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.000
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.000
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.000
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.000