CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa02683
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Aa02683
T288978_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa02683.1.p
Myb
75
121
KCRWSPEENELLTQLVNKHGTKNWQTIACALPDRNAHACLSRWKYIL
Pavir.Aa02683.1.p
Myb
335
381
KGRWLAEENEMLTKMVTKHGLKSWQTIASAIPGRNAQQCRIRWTRSL
Pavir.Aa02683.1.p
Myb
387
430
KEDWSEQEELKLIRAHQIYGSQWLKMVKHFPGRTNHALKEHWRG
Pavir.Aa02683.2.p
Myb
75
121
KCRWSPEENELLTQLVNKHGTKNWQTIACALPDRNAHACLSRWKYIL
Pavir.Aa02683.2.p
Myb
127
170
KEAWSQQEELRLIRAHQIYGNKWCKMAKHFPGRTNNALKEHWRG
Pavir.Aa02683.2.p
Myb
335
378
KGRWLAEENEMLTKMVTKHGLKSWQTIASAIPGRNAQQCRIRRH
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J00515
Panicum virgatum
Pavir.J00515
N
0.857