Pavir.Ca01212 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ca01212 T289063_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01212.1.p Myb 19 66

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GRMZM2G121111 Zea mays GRMZM2G121111 I 0.687
Si025176m.g Setaria italica Si025176m.g I 0.683
Sb10g009580 Sorghum bicolor Sb10g009580 I 0.788
F775_24973 Aegilops tauschii F775_24973 N 0.671
Pavir.J00201 Panicum virgatum Pavir.J00201 N 0.685
Pavir.J00200 Panicum virgatum Pavir.J00200 N 0.728
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N 0.722
Si015542m.g Setaria italica Si015542m.g N 0.703
Si007873m.g Setaria italica Si007873m.g N 0.721
Sb10g009650 Sorghum bicolor Sb10g009650 N 0.797
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.800
Sb09g003300 Sorghum bicolor Sb09g003300 N 0.702
Sb09g003290 Sorghum bicolor Sb09g003290 N 0.702
Sb01g029290 Sorghum bicolor Sb01g029290 N 0.772
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.673