Pavir.Ia04593 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia04593 T289270_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04593.1.p Myb 465 509
Pavir.Ia04593.1.p Myb 592 638

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si009576m.g Setaria italica Si009576m.g N 0.884
MLOC_6586 Hordeum vulgare MLOC_6586 N 0.842
F775_10551 Aegilops tauschii F775_10551 N 0.816
TRIUR3_30450 Triticum urartu TRIUR3_30450 N 0.809
Traes_1AL_206AE5B76 Triticum aestivum Traes_1AL_206AE5B76 N 0.809
Traes_1DL_B7E76AFE6 Triticum aestivum Traes_1DL_B7E76AFE6 N 0.795
Traes_1BL_405FE0DBA Triticum aestivum Traes_1BL_405FE0DBA N 0.778
AC197056.3_FG005 Zea mays AC197056.3_FG005 N 0.731
scaffold_600585.1 Arabidopsis lyrata scaffold_600585.1 N 0.677
AT5G06110 Arabidopsis thaliana AT5G06110 N 0.677
Thhalv10020260m.g Eutrema salsugineum Thhalv10020260m.g N 0.671
fgenesh1_pm.scaffold_150000001 Physcomitrella patens fgenesh1_pm.scaffold_150000001 N 0.669
Bra001404 Brassica rapa Bra001404 N 0.667
Thhalv10012905m.g Eutrema salsugineum Thhalv10012905m.g N 0.665