CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J00035
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.J00035
T289296_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J00035.1.p
Myb
200
249
RVTWTVELHEKFLDAIDVLGDNYATPEKIRKLMNVKGLTCKHISSHLQKH
Pavir.J00035.2.p
Myb
156
205
RVTWTVELHEKFLDAIDVLGDNYATPEKIRKLMNVKGLTCKHISSHLQKH
Pavir.J00035.3.p
Myb
120
169
RVTWTVELHEKFLDAIDVLGDNYATPEKIRKLMNVKGLTCKHISSHLQKH
Pavir.J00035.4.p
Myb
120
169
RVTWTVELHEKFLDAIDVLGDNYATPEKIRKLMNVKGLTCKHISSHLQKH
Pavir.J00035.5.p
Myb
156
205
RVTWTVELHEKFLDAIDVLGDNYATPEKIRKLMNVKGLTCKHISSHLQKH
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Db00207
Panicum virgatum
Pavir.Db00207
N
0.776