Pavir.J04337 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J04337 T289327_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J04337.1.p Myb 37 85
Pavir.J04337.1.p Myb 155 200

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si022816m.g Setaria italica Si022816m.g N 0.835
GRMZM2G002128 Zea mays GRMZM2G002128 N 0.804
GRMZM2G370896 Zea mays GRMZM2G370896 N 0.797
Sb09g022060 Sorghum bicolor Sb09g022060 N 0.787
BRADI2G23710 Brachypodium distachyon BRADI2G23710 N 0.771
MLOC_70659 Hordeum vulgare MLOC_70659 N 0.751
Pavir.Ea03421 Panicum virgatum Pavir.Ea03421 N 0.702
ORGLA05G0161500 Oryza glaberrima ORGLA05G0161500 N 0.694
ORUFI05G19800 Oryza rufipogon ORUFI05G19800 N 0.694
OS05G0449900 Oryza sativa OS05G0449900 N 0.694
OPUNC05G16320 Oryza punctata OPUNC05G16320 N 0.694
OMERI05G16220 Oryza meridionalis OMERI05G16220 N 0.694
ONIVA05G19570 Oryza nivara ONIVA05G19570 N 0.694
OGLUM05G19710 Oryza glumaepatula OGLUM05G19710 N 0.694
BGIOSGA017944 Oryza indica BGIOSGA017944 N 0.694
F775_29279 Aegilops tauschii F775_29279 N 0.687
TRAES3BF018800030CFD_g Triticum aestivum TRAES3BF018800030CFD_g N 0.687
LPERR05G14660 Leersia perrieri LPERR05G14660 N 0.685
OB05G26340 Oryza brachyantha OB05G26340 N 0.685
Si002423m.g Setaria italica Si002423m.g N 0.665
GRMZM2G056986 Zea mays GRMZM2G056986 N 0.664