Pavir.J05795 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J05795 T289334_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J05795.1.p Myb 115 161
Pavir.J05795.1.p Myb 169 213

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ea03785 Panicum virgatum Pavir.Ea03785 N 0.857
Si004755m.g Setaria italica Si004755m.g N 0.791
MLOC_14401 Hordeum vulgare MLOC_14401 N 0.716
Si039882m.g Setaria italica Si039882m.g N 0.694
TRAES3BF012200010CFD_g Triticum aestivum TRAES3BF012200010CFD_g N 0.693
Sb07g004460 Sorghum bicolor Sb07g004460 N 0.687
Sb01g013830 Sorghum bicolor Sb01g013830 N 0.676
OPUNC01G36560 Oryza punctata OPUNC01G36560 N 0.662