CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0122s0490
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0122s0490
T289600_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.831
0.871
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0122s0490.1.p
Myb
27
74
RGLWSPDEDEKLVKYITTHGHGSWSSVPKLAGLQRCGKSCRLRWINYL
SapurV1A.0122s0490.1.p
Myb
80
125
RGSFTALEESIIVEVHRMLGNRWAQIAKHLPGRTDNEVKNFWNSCI
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy