CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0151s0280
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0151s0280
T289619_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB39
M07106_2.00
Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_col_a
0.661
0.720
MYB39
M07107_2.00
Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB39_colamp_a
0.661
0.720
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0151s0280.1.p
Myb
14
61
KGPWTPDEDTKLIDYIERNGHENWKALPNLAGLNRCGKSCRLRWINYL
SapurV1A.0151s0280.1.p
Myb
67
112
RGEFSEDEERVIVNLHSALGNKWSRIANHLPGRTDNDIKNFWNTHI
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy