CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0367s0020
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0367s0020
T289702_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.773
0.860
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.750
0.796
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.750
0.796
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.712
0.806
MYB46
M00877_2.00
Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN
PBM
Franco-Zorrilla et al.(2014)
MYB46
0.672
0.667
MYB46
M11046_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB46_Q6
0.672
0.667
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0367s0020.1.p
Myb
14
61
KGPWTAEEDKKLVNFILSHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL
SapurV1A.0367s0020.1.p
Myb
67
112
RGLLNEDEEKLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTYI
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
295 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy