SapurV1A.1416s0010 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.1416s0010 T289856_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.816 0.860
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.816 0.860
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.809 0.903
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.809 0.903
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.757 0.774
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.757 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.1416s0010.1.p Myb 121 167
SapurV1A.1416s0010.1.p Myb 173 218

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA03G33690 Glycine max GLYMA03G33690 I 0.000
chr1.CM0033.600.nc Lotus japonicus chr1.CM0033.600.nc I 0.000
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.000
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.000
cassava3577.m1 Manihot esculenta cassava3577.m1 I 0.000
Ca_12031 Cicer arietinum Ca_12031 I 0.000
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.000
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.000
TCM_041055 Theobroma cacao TCM_041055 I 0.000
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I 0.000
MTR_7g100990 Medicago truncatula MTR_7g100990 I 0.000
MTR_2g093810 Medicago truncatula MTR_2g093810 I 0.000
GLYMA19G36421 Glycine max GLYMA19G36421 I 0.000
GLYMA13G40251 Glycine max GLYMA13G40251 I 0.000
GLYMA05G15533 Glycine max GLYMA05G15533 I 0.000
GLYMA12G29360 Glycine max GLYMA12G29360 I 0.000
GLYMA12G21272 Glycine max GLYMA12G21272 I 0.000
GLYMA10G09246 Glycine max GLYMA10G09246 N 0.000
Pm001001 Prunus mume Pm001001 N 0.000
PRUPE_ppa017586mg Prunus persica PRUPE_ppa017586mg N 0.000