Thhalv10015404m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10015404m.g T290061_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015404m Myb 103 149
Thhalv10015404m Myb 155 200

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_22212 Aegilops tauschii F775_22212 I 0.682
AMTR_s00001p00272410 Amborella trichopoda AMTR_s00001p00272410 N 0.681
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.854
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.840
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.854
MYB64 Arabidopsis thaliana AT5G11050 N 0.849
Bostr.23997s0007 Boechera stricta Bostr.23997s0007 N 0.773
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.888
Bo3g018490 Brassica oleracea Bo3g018490 I 0.867
Bo2g028290 Brassica oleracea Bo2g028290 I 0.880
Bra025299 Brassica rapa Bra025299 I 0.661
Bra020346 Brassica rapa Bra020346 I 0.875
Bra006744 Brassica rapa Bra006744 I 0.867
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.854
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.801
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.801
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.854
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.736
Ca_17294 Cicer arietinum Ca_17294 I 0.698
Cla008304 Citrullus lanatus Cla008304 N 0.769
Cla010586 Citrullus lanatus Cla010586 I 0.662
Cla019490 Citrullus lanatus Cla019490 I 0.687
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.782
Ciclev10024427m.g Citrus clementina Ciclev10024427m.g I 0.681
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.782
orange1.1g046859m.g Citrus sinensis orange1.1g046859m.g I 0.681
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.690
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.766
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.706
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.909
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.834
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.706
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.731
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.706
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.763
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.710
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.774
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.681
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.728
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.728
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.682
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.752
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.678
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.748
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.697
chr4.CM0042.120.nd Lotus japonicus chr4.CM0042.120.nd N 0.736
MDP0000555913 Malus domestica MDP0000555913 N 0.674
MDP0000215359 Malus domestica MDP0000215359 I 0.681
MDP0000319656 Malus domestica MDP0000319656 I 0.728
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.750
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.678
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.760
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.703
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.683
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.677
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.773
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.702
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.685
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.690
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.686
GSMUA_Achr8G02290_001 Musa acuminata GSMUA_Achr8G02290_001 N 0.663
OBART06G04170 Oryza barthii OBART06G04170 I 0.682
OB06G13860 Oryza brachyantha OB06G13860 I 0.682
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.682
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.682
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.682
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.682
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.682
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.682
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.682
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.682
OS06G0162700 Oryza sativa OS06G0162700 I 0.682
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.703
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.703
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.679
Pavir.J37434 Panicum virgatum Pavir.J37434 I 0.666
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.700
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.727
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.681
POPTR_0005s12050 Populus trichocarpa POPTR_0005s12050 I 0.664
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.746
Pm000541 Prunus mume Pm000541 I 0.731
Pm024743 Prunus mume Pm024743 I 0.706
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.706
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.731
29681.m001315 Ricinus communis 29681.m001315 N 0.750
30147.m013937 Ricinus communis 30147.m013937 I 0.678
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.692
SapurV1A.0396s0170 Salix purpurea SapurV1A.0396s0170 I 0.669
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.687
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.716
Si039046m.g Setaria italica Si039046m.g I 0.661
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.685
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.700
PGSC0003DMG400036895 Solanum tuberosum PGSC0003DMG400036895 I 0.685
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.700
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.686
TCM_012087 Theobroma cacao TCM_012087 I 0.681
TCM_041651 Theobroma cacao TCM_041651 N 0.707
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.682
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.682
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.668
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.669
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.682
VIT_06s0004g06280 Vitis vinifera VIT_06s0004g06280 N 0.680
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.706
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.680