6675_YER088C (Saccharomyces paradoxus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 6675_YER088C T290625_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DOT6
M00064_2.00
Saccharomyces cerevisiae
SKCATCGV

BCGATGMS
PBM
Badis et al.(2008)
DOT6_2080
0.909 0.978
DOT6
M01560_2.00
Saccharomyces cerevisiae
VBCATCDN

NHGATGVB
PBM
Zhu et al.(2009)
Pbf2
0.909 0.978
DOT6
M08595_2.00
Saccharomyces cerevisiae
NNNNDNWSCTCATCGVNHNNN

NNNDNBCGATGAGSWNHNNNN
Misc
DeBoer et al.(2011)
YER088C_812
0.909 0.978
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
6675_YER088C Myb 72 117

Links

Other Myb/SANT family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action