CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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6675_YER088C
(
Saccharomyces paradoxus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
6675_YER088C
T290625_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DOT6
M00064_2.00
Saccharomyces cerevisiae
SKCATCGV
BCGATGMS
PBM
Badis et al.(2008)
DOT6_2080
0.909
0.978
DOT6
M01560_2.00
Saccharomyces cerevisiae
VBCATCDN
NHGATGVB
PBM
Zhu et al.(2009)
Pbf2
0.909
0.978
DOT6
M08595_2.00
Saccharomyces cerevisiae
NNNNDNWSCTCATCGVNHNNN
NNNDNBCGATGAGSWNHNNNN
Misc
DeBoer et al.(2011)
YER088C_812
0.909
0.978
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
6675_YER088C
Myb
72
117
PSSWDPQDDLLLRHLKEVRKMGWKDISQYFPNRTPNACQFRWRRLK
Links
Other
Myb/SANT
family TFs
Other
Saccharomyces paradoxus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy