CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_50397
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_Genewise1Plus.C_50397
T290837_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_50397
Myb
15
60
CKWTEKEDLMMLKLVQKYGTRHWTIIGTKLPGRNGKQCRERWHNQL
estExt_Genewise1Plus.C_50397
Myb
66
111
KEPWTPEEENVLKELHDKFGNKWAEIAKLLPGRTDNAIKNHWNSSK
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_05796
Phytophthora parasitica
F443_05796
N
0.866
fgenesh_scip_prom.46568.4159
Phytophthora kernoviae
fgenesh_scip_prom.46568.4159
N
0.855
PITG_00988
Phytophthora infestans
PITG_00988
N
0.842
Physo127096
Phytophthora sojae
Physo127096
N
0.839
fgenesh_scip_prom.28083.3613
Phytophthora lateralis
fgenesh_scip_prom.28083.3613
N
0.834
Phyra94941
Phytophthora ramorum
Phyra94941
N
0.834
maker-pve_contig_56-snap-gene-0.44
Pythium vexans
maker-pve_contig_56-snap-gene-0.44
N
0.825
maker-pag1_scaffold_286-snap-gene-0.20
Pythium aphanidermatum
maker-pag1_scaffold_286-snap-gene-0.20
N
0.792
maker-piw_contig_1077-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_1077-fgenesh-gene-0.0
N
0.783
PYU1_G001895
Pythium ultimum
PYU1_G001895
N
0.768
maker-pir_contig_290-fgenesh-gene-0.10
Pythium irregulare
maker-pir_contig_290-fgenesh-gene-0.10
N
0.768
ALNC14_036830
Albugo laibachii
ALNC14_036830
N
0.744
snap_masked-par_contig_1902-abinit-gene-0.8
Pythium arrhenomanes
snap_masked-par_contig_1902-abinit-gene-0.8
N
0.741