RSKR_0001027700 (Rhabditophanes kr3021)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 RSKR_0001027700 T291742_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CDC5L
M11049_2.00
Homo sapiens
GWKTTAAYRTAD

HTAYRTTAAMWC
Transfac
Matys et al.(2006)
V$CDC5_01
0.847 0.902
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.779 0.870
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.779 0.870
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0001027700.1 Myb 8 54
RSKR_0001027700.1 Myb 60 104

Links

Other Myb/SANT family TFs
Other Rhabditophanes kr3021 TFs

541 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action