CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.28083.6186
(
Phytophthora lateralis
)
Myb/SANT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
PF00505 (HMG_box)
IPR014778
IPR000910
fgenesh_scip_prom.28083.6186
T291903_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.28083.6186
Sox
30
106
PAKARSAYQFFQKSAMDVVKRDVAARAAETGEPMELGSISKEMSARWAQLSAGEREEFVELAAADKKRYDDECRARD
fgenesh_scip_prom.28083.6186
Myb
1045
1099
GKVFTEEEDRVLLCLVNQFGYGAWDRIKQEICSMEMFAFDYYLRSRTAAEIGRRC
fgenesh_scip_prom.28083.6186
Sox
1328
1396
VRKPRSAYVLFSVASRVEVKQSLGENPQMVDVMRRLSQIWKDMGPEDRAPWMEAAKQDQLRYESEMNET
Links
Other
Myb/SANT,Sox
family TFs
Other
Phytophthora lateralis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra80472
Phytophthora ramorum
Phyra80472
N
0.978
Physo128440
Phytophthora sojae
Physo128440
N
0.830
PITG_02286
Phytophthora infestans
PITG_02286
N
0.783
fgenesh_scip_prom.46568.569
Phytophthora kernoviae
fgenesh_scip_prom.46568.569
N
0.779
F443_18902
Phytophthora parasitica
F443_18902
N
0.772