CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g064960
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo6g064960
T292428_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g064960.1
NAC/NAM
9
140
PVGFRFRPTDCEISKYFLTRKALEQRMRGPNVPEECHDIFSRRPRDLPGYPRETHWYFYCRKLDGQVTYNSHSIWKQIGEETGVLDPKNNDTLVGIKRPFTFVDHKEEPDDILLSDEDEPPQYNWFMDEFSL
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra028486
Brassica rapa
Bra028486
N
0.999
Thhalv10027901m.g
Eutrema salsugineum
Thhalv10027901m.g
N
0.997
AT3G56520
Arabidopsis thaliana
AT3G56520
N
0.995
fgenesh1_pm.C_scaffold_5001708
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001708
N
0.992
Bostr.7200s0128
Boechera stricta
Bostr.7200s0128
N
0.988
anac095
Arabidopsis thaliana
AT5G41090
N
0.985
Bostr.20505s0102
Boechera stricta
Bostr.20505s0102
N
0.983
anac095
Arabidopsis lyrata
Al_scaffold_0007_3541
N
0.981
Thhalv10006451m.g
Eutrema salsugineum
Thhalv10006451m.g
N
0.978
scaffold_500654.1
Arabidopsis lyrata
scaffold_500654.1
N
0.963
Carubv10005574m.g
Capsella rubella
Carubv10005574m.g
N
0.943
Cagra.1914s0015
Capsella grandiflora
Cagra.1914s0015
N
0.938
Bra007254
Brassica rapa
Bra007254
N
0.908
Bo8g090950
Brassica oleracea
Bo8g090950
N
0.908
mgf006124m
Mimulus guttatus
mgf006124m
N
0.886
Bo6g072200
Brassica oleracea
Bo6g072200
N
0.873