CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART02G12540
(
Oryza barthii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OBART02G12540
T293966_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART02G12540.1
NAC/NAM
11
151
SPGFKFNPSVEQLLCFFLLPYLQHRRLLVDGVVFLDDPASAPPWALLHRHGRGGEDEAYFIGPVPAGDGHGGRRQQQVSRTVTGGGGGKWIKQRTERPRGEEEPVVVFGGETFRWEEFSLNFHRDDRRSGSTGWVMHEFAV
Links
Other
NAC/NAM
family TFs
Other
Oryza barthii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA02G0112700
Oryza glaberrima
ORGLA02G0112700
N
0.994
OGLUM02G12800
Oryza glumaepatula
OGLUM02G12800
N
0.993
BGIOSGA006685
Oryza indica
BGIOSGA006685
N
0.988
OMERI02G13470
Oryza meridionalis
OMERI02G13470
N
0.984
OPUNC02G11210
Oryza punctata
OPUNC02G11210
N
0.963
OB02G21080
Oryza brachyantha
OB02G21080
N
0.941
BGIOSGA006686
Oryza indica
BGIOSGA006686
N
0.906
OMERI02G13440
Oryza meridionalis
OMERI02G13440
N
0.906
OS02G0285900
Oryza sativa
OS02G0285900
N
0.904
OB02G21090
Oryza brachyantha
OB02G21090
N
0.901
OGLUM02G12410
Oryza glumaepatula
OGLUM02G12410
N
0.894
OPUNC02G11190
Oryza punctata
OPUNC02G11190
N
0.881