CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS01G0393100
(
Oryza sativa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OS01G0393100
T294993_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.905
0.600
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.905
0.600
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY
RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.905
0.600
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.893
0.765
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.893
0.765
NAC48
M11084_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.873
0.574
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS01T0393100-01
NAC/NAM
15
142
PPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPGKAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRNHHMLIGMKKTLVFYKGRAPKGDKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Oryza sativa
TFs
292 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy