CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400012607
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400012607
T295125_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.883
0.605
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.881
0.605
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400032828
NAC/NAM
56
197
PVGVKFDPSDAELVEHLEAKCGVGNSEQHKFIDEFIPTLDVHEGICYTHPENLPGAKKDGSSIHFFYRITNAYATGKRKRRKIHDENNLMKEHVRWHKTGKTKVVMENGFQKGCKKVMVLYQTIKKGSKQEKTNWVMHQYHL
PGSC0003DMT400032829
NAC/NAM
56
197
PVGVKFDPSDAELVEHLEAKCGVGNSEQHKFIDEFIPTLDVHEGICYTHPENLPGAKKDGSSIHFFYRITNAYATGKRKRRKIHDENNLMKEHVRWHKTGKTKVVMENGFQKGCKKVMVLYQTIKKGSKQEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy