CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0011s12190
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0011s12190
T295299_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0011s12190.1
NAC/NAM
18
148
LPGYRFNPYDEELVRFFLYPKLTNPCFTTSAPVRDCNLYACQPLQIWNTFHRIHGEDVFFFTDLKRKSPNSNVSRKIAGGPATWHREDKDHQVCVQIDKNYSVTALKKGFSYRNTQPHQPGCSWMMYEYSL
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.2875s0010
Salix purpurea
SapurV1A.2875s0010
N
0.985
SapurV1A.3536s0010
Salix purpurea
SapurV1A.3536s0010
N
0.983
POPTR_0004s10700
Populus trichocarpa
POPTR_0004s10700
N
0.974
POPTR_0004s10720
Populus trichocarpa
POPTR_0004s10720
N
0.973
SapurV1A.2425s0030
Salix purpurea
SapurV1A.2425s0030
N
0.973
SapurV1A.0858s0140
Salix purpurea
SapurV1A.0858s0140
N
0.973
POPTR_0005s08440
Populus trichocarpa
POPTR_0005s08440
N
0.966
SapurV1A.0014s0300
Salix purpurea
SapurV1A.0014s0300
N
0.958