Solyc06g034340.1 (Solanum lycopersicum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Solyc06g034340.1 T295858_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG

CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.934 0.860
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG

CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.929 0.886
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG

CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.929 0.886
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG

CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.924 0.842
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN

NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.924 0.842
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.889 0.772
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.889 0.772
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN

NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.885 0.781
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.876 0.798
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN

NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.874 0.816
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG

CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.874 0.816
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG

CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.874 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g034340.1.1 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Solanum lycopersicum TFs

338 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N 0.000
BGIOSGA001192 Oryza indica BGIOSGA001192 N 0.000
BGIOSGA001193 Oryza indica BGIOSGA001193 N 0.000
Bo9g003750 Brassica oleracea Bo9g003750 N 0.000
Bra037388 Brassica rapa Bra037388 N 0.000
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N 0.000
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N 0.000
GRMZM2G057955 Zea mays GRMZM2G057955 N 0.000
LPERR01G19720 Leersia perrieri LPERR01G19720 N 0.000
LPERR01G19750 Leersia perrieri LPERR01G19750 N 0.000
Lus10005949.g Linum usitatissimum Lus10005949.g N 0.000
MLOC_68772 Hordeum vulgare MLOC_68772 N 0.000
OB01G32460 Oryza brachyantha OB01G32460 N 0.000
OB01G32480 Oryza brachyantha OB01G32480 N 0.000
OBART01G22950 Oryza barthii OBART01G22950 N 0.000
OBART01G22980 Oryza barthii OBART01G22980 N 0.000
OGLUM01G26700 Oryza glumaepatula OGLUM01G26700 N 0.000
OGLUM01G26760 Oryza glumaepatula OGLUM01G26760 N 0.000
OLONG_010128 Oryza longistaminata OLONG_010128 N 0.000
OMERI01G21040 Oryza meridionalis OMERI01G21040 N 0.000
OPUNC01G23150 Oryza punctata OPUNC01G23150 N 0.000
ORGLA01G0184700 Oryza glaberrima ORGLA01G0184700 N 0.000
ORUFI01G25760 Oryza rufipogon ORUFI01G25760 N 0.000
ORUFI01G25800 Oryza rufipogon ORUFI01G25800 N 0.000
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N 0.000
Pavir.J30777 Panicum virgatum Pavir.J30777 N 0.000
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.000
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.000
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N 0.000
Sb03g028170 Sorghum bicolor Sb03g028170 N 0.000
TCM_015351 Theobroma cacao TCM_015351 N 0.000
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N 0.000
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N 0.000
TRIUR3_10842 Triticum urartu TRIUR3_10842 N 0.000