CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm005306
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm005306
T296625_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm005306
NAC/NAM
13
142
PPGCRFYPSEEQLLCCYLSNKNDADPAQSGGYDLIRELDLYDHDPFDLPDSACYAYGHAGRKRHWFCYTVRVLKERRAKSGYWRRKGRDRDVVGRGGKAVLGRRTSFVFYLGNSPNTAVRTDWVLYQYAQ
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa023250mg
Prunus persica
PRUPE_ppa023250mg
N
0.999
MDP0000152774
Malus domestica
MDP0000152774
N
0.997
PGSC0003DMG400007953
Solanum tuberosum
PGSC0003DMG400007953
N
0.989
Solyc04g078670.2
Solanum lycopersicum
Solyc04g078670.2
N
0.988
GLYMA17G35930
Glycine max
GLYMA17G35930
N
0.984
GLYMA14G09240
Glycine max
GLYMA14G09240
N
0.983
evm.TU.supercontig_21.173
Carica papaya
evm.TU.supercontig_21.173
N
0.942
Lus10010371.g
Linum usitatissimum
Lus10010371.g
N
0.933
Lus10010037.g
Linum usitatissimum
Lus10010037.g
N
0.932
VIT_18s0001g10250
Vitis vinifera
VIT_18s0001g10250
N
0.915