CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.118330
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.118330
T296965_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.118330.1
NAC/NAM
18
147
LPGFRFHPTDEELVDYYLRRKVDKKSVTLELIKQIDIYRHNPWDLPYGGAATGEKECYVFVKRGRKYKNSVRPNRVTGAGFWKATGIDKPIYSQEGEGNRCIGLKKTLVFYKGSAGRGVKTEWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla013683
Citrullus lanatus
Cla013683
N
0.957
Solyc05g007550.1
Solanum lycopersicum
Solyc05g007550.1
I
0.898
PGSC0003DMG400031266
Solanum tuberosum
PGSC0003DMG400031266
I
0.894
Cla005599
Citrullus lanatus
Cla005599
I
0.890
mgf025649m
Mimulus guttatus
mgf025649m
I
0.879
TCM_018508
Theobroma cacao
TCM_018508
I
0.878
MDP0000241821
Malus domestica
MDP0000241821
I
0.873
Gorai.006G017700
Gossypium raimondii
Gorai.006G017700
I
0.873
MTR_5g040420
Medicago truncatula
MTR_5g040420
I
0.873
Bo8g076410
Brassica oleracea
Bo8g076410
I
0.873
MTR_6g011860
Medicago truncatula
MTR_6g011860
I
0.872
MDP0000186765
Malus domestica
MDP0000186765
I
0.871