CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.239650
(
Cucumis sativus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Cucsa.239650
T296994_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.239650.1
NAC/NAM
19
152
LPGFRFHPTDEELVSFYLRRKVEKRPLSIELIKQIDIYKHNPWDLPYGSSCSKMGLGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKGVYSNGGEGNECIGLKKTLVYYRGSAGKGSKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Cucumis sativus
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla005599
Citrullus lanatus
Cla005599
I
0.941
Ciclev10005465m.g
Citrus clementina
Ciclev10005465m.g
I
0.917
orange1.1g046948m.g
Citrus sinensis
orange1.1g046948m.g
I
0.917
Ciclev10006695m.g
Citrus clementina
Ciclev10006695m.g
I
0.917
Lus10031189.g
Linum usitatissimum
Lus10031189.g
I
0.916
Lus10031767.g
Linum usitatissimum
Lus10031767.g
I
0.916
POPTR_0007s08340
Populus trichocarpa
POPTR_0007s08340
I
0.913
Gorai.002G036700
Gossypium raimondii
Gorai.002G036700
I
0.910
30169.m006343
Ricinus communis
30169.m006343
I
0.909
Cla010347
Citrullus lanatus
Cla010347
I
0.908
cassava34069.m1
Manihot esculenta
cassava34069.m1
I
0.907
SapurV1A.0354s0230
Salix purpurea
SapurV1A.0354s0230
I
0.904
Cucsa.285120
Cucumis sativus
Cucsa.285120
I
0.902
cassava20477.m1
Manihot esculenta
cassava20477.m1
I
0.902
GLYMA13G05350
Glycine max
GLYMA13G05350
I
0.901
GLYMA19G02580
Glycine max
GLYMA19G02580
I
0.901
POPTR_0005s22710
Populus trichocarpa
POPTR_0005s22710
I
0.893
POPTR_0004s12850
Populus trichocarpa
POPTR_0004s12850
I
0.892
chr2.LjT04L10.100.nc
Lotus japonicus
chr2.LjT04L10.100.nc
I
0.891
orange1.1g047852m.g
Citrus sinensis
orange1.1g047852m.g
I
0.891
MTR_5g040420
Medicago truncatula
MTR_5g040420
I
0.890
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.889
PRUPE_ppa022043mg
Prunus persica
PRUPE_ppa022043mg
I
0.888
PRUPE_ppa016710mg
Prunus persica
PRUPE_ppa016710mg
I
0.888
GLYMA18G13574
Glycine max
GLYMA18G13574
I
0.887
TCM_001955
Theobroma cacao
TCM_001955
I
0.886
Gorai.001G091900
Gossypium raimondii
Gorai.001G091900
I
0.885
mgf023960m
Mimulus guttatus
mgf023960m
I
0.885
VIT_19s0027g00870
Vitis vinifera
VIT_19s0027g00870
I
0.885
TCM_018508
Theobroma cacao
TCM_018508
I
0.885
Solyc05g007550.1
Solanum lycopersicum
Solyc05g007550.1
I
0.885
gene03833-v1.0-hybrid
Fragaria vesca
gene03833-v1.0-hybrid
I
0.885
GLYMA14G03441
Glycine max
GLYMA14G03441
I
0.884
LjT46I09.50.nd
Lotus japonicus
LjT46I09.50.nd
I
0.884
Solyc02g069960.2
Solanum lycopersicum
Solyc02g069960.2
I
0.883
Solyc02g087920.2
Solanum lycopersicum
Solyc02g087920.2
I
0.882
PGSC0003DMG400001323
Solanum tuberosum
PGSC0003DMG400001323
I
0.882
GLYMA15G40950
Glycine max
GLYMA15G40950
I
0.881
Gorai.006G017700
Gossypium raimondii
Gorai.006G017700
I
0.881
Pm015876
Prunus mume
Pm015876
I
0.881
PGSC0003DMG400031266
Solanum tuberosum
PGSC0003DMG400031266
I
0.881
VIT_19s0027g00860
Vitis vinifera
VIT_19s0027g00860
I
0.880
BRADI1G58057
Brachypodium distachyon
BRADI1G58057
I
0.880
Ciclev10011891m.g
Citrus clementina
Ciclev10011891m.g
I
0.878
PGSC0003DMG400021119
Solanum tuberosum
PGSC0003DMG400021119
I
0.878
anac042
Vitis vinifera
VIT_12s0028g00860
I
0.878
mgf025649m
Mimulus guttatus
mgf025649m
I
0.877
mgf026196m
Mimulus guttatus
mgf026196m
I
0.877
Cla013684
Citrullus lanatus
Cla013684
I
0.877
MDP0000241821
Malus domestica
MDP0000241821
I
0.877
Aquca_006_00295
Aquilegia coerulea
Aquca_006_00295
I
0.876
GLYMA08G41995
Glycine max
GLYMA08G41995
I
0.876
MDP0000186765
Malus domestica
MDP0000186765
I
0.876
Pm014764
Prunus mume
Pm014764
I
0.876
orange1.1g015827m.g
Citrus sinensis
orange1.1g015827m.g
I
0.876
Lus10015367.g
Linum usitatissimum
Lus10015367.g
I
0.875
Eucgr.I01940
Eucalyptus grandis
Eucgr.I01940
I
0.875
POPTR_0017s11830
Populus trichocarpa
POPTR_0017s11830
I
0.874
Ca_18749
Cicer arietinum
Ca_18749
I
0.874
GLYMA08G41260
Glycine max
GLYMA08G41260
I
0.874
MTR_6g011860
Medicago truncatula
MTR_6g011860
I
0.874
29032.m000021
Ricinus communis
29032.m000021
I
0.874
GLYMA18G15020
Glycine max
GLYMA18G15020
I
0.874
BRADI4G30177
Brachypodium distachyon
BRADI4G30177
I
0.873
GSMUA_Achr6G02680_001
Musa acuminata
GSMUA_Achr6G02680_001
I
0.873
Lus10007263.g
Linum usitatissimum
Lus10007263.g
I
0.873
Traes_5AL_F35B9FF8E
Triticum aestivum
Traes_5AL_F35B9FF8E
I
0.873
TRIUR3_01901
Triticum urartu
TRIUR3_01901
I
0.873
cassava38350.m1
Manihot esculenta
cassava38350.m1
I
0.873
29813.m001479
Ricinus communis
29813.m001479
I
0.873
Traes_5BL_38DFDFE41
Triticum aestivum
Traes_5BL_38DFDFE41
I
0.873
Traes_5DL_0713E8429
Triticum aestivum
Traes_5DL_0713E8429
I
0.873
Ciclev10031623m.g
Citrus clementina
Ciclev10031623m.g
I
0.873
PRUPE_ppa022278mg
Prunus persica
PRUPE_ppa022278mg
I
0.872
Pm006506
Prunus mume
Pm006506
I
0.872
Bo8g076410
Brassica oleracea
Bo8g076410
I
0.872
Ca_26322
Cicer arietinum
Ca_26322
I
0.872
cassava39074.m1
Manihot esculenta
cassava39074.m1
I
0.872
GLYMA02G45371
Glycine max
GLYMA02G45371
I
0.872
POPTR_0002s05820
Populus trichocarpa
POPTR_0002s05820
I
0.872
Aquca_002_00586
Aquilegia coerulea
Aquca_002_00586
I
0.872
GRMZM2G159094
Zea mays
GRMZM2G159094
I
0.871
Pavir.Bb02181
Panicum virgatum
Pavir.Bb02181
I
0.871
Gorai.005G141200
Gossypium raimondii
Gorai.005G141200
I
0.871