CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.77.154.1
(
Physcomitrella patens
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
gw1.77.154.1
T297056_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.77.154.1
NAC/NAM
2
136
PVGFRFHPTDEELVGWYLHNRVTAPPPEPREDDQRIIRELDLYKHEPWDLAEVCKIPGDHSVNQNNWYFFSHKDKKYPTGNRANRATKAGFWKATGRDKCIQTRYSVGMRKTLVFYKGRAPHGQKTDWIMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Physcomitrella patens
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g113180
Brassica oleracea
Bo7g113180
N
0.963
Bo8g054390
Brassica oleracea
Bo8g054390
N
0.960
Bra010362
Brassica rapa
Bra010362
N
0.960
Cagra.1225s0038
Capsella grandiflora
Cagra.1225s0038
N
0.959
Bra024194
Brassica rapa
Bra024194
N
0.959
Carubv10005139m.g
Capsella rubella
Carubv10005139m.g
N
0.959
Thhalv10025606m.g
Eutrema salsugineum
Thhalv10025606m.g
N
0.959
Bra011037
Brassica rapa
Bra011037
N
0.959
anac074
Arabidopsis thaliana
AT4G28530
N
0.959
anac074
Arabidopsis lyrata
fgenesh2_kg.7__1345__AT4G28530.1
N
0.957
Bostr.7867s0694
Boechera stricta
Bostr.7867s0694
N
0.957
Bo1g017380
Brassica oleracea
Bo1g017380
N
0.956
AMTR_s00046p00062600
Amborella trichopoda
AMTR_s00046p00062600
N
0.924
PK20262.1
Cannabis sativa
PK20262.1
N
0.901