Cagra.0834s0029 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.0834s0029 T297366_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.970 1.000
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.970 1.000
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0834s0029.1.p NAC/NAM 28 154
Cagra.0834s0029.2.p NAC/NAM 28 154

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action