Cagra.1365s0094 (Capsella grandiflora)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Cagra.1365s0094 T297390_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.937 0.798
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.937 0.798
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.937 0.798
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.930 0.798
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY

RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.877 0.649
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1365s0094.1.p NAC/NAM 8 131

Links

Other NAC/NAM family TFs
Other Capsella grandiflora TFs

382 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGLB000529 Biomphalaria glabrata BGLB000529 N 0.000
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N 0.000
BLOC1S6 Sorex araneus ENSSARG00000009861 N 0.000
CAOG_03637 Capsaspora owczarzaki CAOG_03637 N 0.000
GE16904 Drosophila yakuba FBgn0234394 N 0.000
GF19613 Drosophila ananassae FBgn0096620 N 0.000
GRMZM2G424261 Zea mays GRMZM2G424261 N 0.000
LjSGA_135269.1 Lotus japonicus LjSGA_135269.1 N 0.000
MDP0000420968 Malus domestica MDP0000420968 N 0.000
Pavir.Fa00930 Panicum virgatum Pavir.Fa00930 N 0.000
Si014095m.g Setaria italica Si014095m.g N 0.000
Traes_7AS_FCC142DBE Triticum aestivum Traes_7AS_FCC142DBE N 0.000
TRIM56 Anolis carolinensis ENSACAG00000007859 N 0.000
TRIUR3_03984 Triticum urartu TRIUR3_03984 N 0.000
TRIUR3_26293 Triticum urartu TRIUR3_26293 N 0.000
ZBAI_00205 Zygosaccharomyces bailii ZBAI_00205 N 0.000