Carubv10009049m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10009049m.g T297484_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.918 0.496
NAC001
M00969_2.00
Arabidopsis thaliana
NYACGBHANN

NNTDVCGTRN
PBM
Lindemose et al.(2014)
FL092
0.899 0.783
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009049m NAC/NAM 4 138

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.932
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I 0.885
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.918
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.944
NAC001 Arabidopsis thaliana AT1G01010 D 0.899
NAC69 Arabidopsis thaliana AT4G01550 D 0.918
BGIOSGA016546 Oryza indica BGIOSGA016546 I 0.886
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.911
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.882
Bo00853s060 Brassica oleracea Bo00853s060 I 0.888
Bo5g002810 Brassica oleracea Bo5g002810 I 0.980
Bo5g002830 Brassica oleracea Bo5g002830 N 0.927
Bo5g002850 Brassica oleracea Bo5g002850 I 0.981
Bo5g002860 Brassica oleracea Bo5g002860 N 0.945
Bo6g119080 Brassica oleracea Bo6g119080 I 0.905
Bo9g004070 Brassica oleracea Bo9g004070 I 0.942
Bo9g004090 Brassica oleracea Bo9g004090 I 0.905
Bo9g004110 Brassica oleracea Bo9g004110 I 0.885
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.933
Bostr.15697s0466 Boechera stricta Bostr.15697s0466 N 0.896
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.941
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.920
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.983
Bostr.5325s0010 Boechera stricta Bostr.5325s0010 N 0.881
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.943
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.988
Bra008553 Brassica rapa Bra008553 I 0.892
Bra027596 Brassica rapa Bra027596 I 0.925
Bra033296 Brassica rapa Bra033296 I 0.967
Bra036328 Brassica rapa Bra036328 I 0.932
BRADI1G52480 Brachypodium distachyon BRADI1G52480 N 0.882
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.885
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.892
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.996
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.901
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.894
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.984
cassava29774.valid.m1 Manihot esculenta cassava29774.valid.m1 I 0.885
cassava29775.valid.m1 Manihot esculenta cassava29775.valid.m1 I 0.885
Ca_20988 Cicer arietinum Ca_20988 I 0.952
Ca_27204 Cicer arietinum Ca_27204 I 0.877
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.879
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.879
e_gw1.259.32.1 Physcomitrella patens e_gw1.259.32.1 I 0.879
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.873
F775_13961 Aegilops tauschii F775_13961 I 0.886
F775_30082 Aegilops tauschii F775_30082 I 0.883
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.980
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.887
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.918
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I 0.882
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.880
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.884
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.876
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.876
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.898
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.900
GRMZM2G139700 Zea mays GRMZM2G139700 I 0.875
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.883
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.893
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.892
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.901
LPERR04G11740 Leersia perrieri LPERR04G11740 I 0.873
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.884
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.914
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.892
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.898
MDP0000136652 Malus domestica MDP0000136652 N 0.880
MDP0000182344 Malus domestica MDP0000182344 N 0.880
MDP0000282616 Malus domestica MDP0000282616 I 0.924
MDP0000575835 Malus domestica MDP0000575835 I 0.883
mgf022344m Mimulus guttatus mgf022344m I 0.945
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.911
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.892
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.883
MLOC_75297 Hordeum vulgare MLOC_75297 N 0.879
MTR_1g008740 Medicago truncatula MTR_1g008740 I 0.873
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.943
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.906
MTR_8g023880 Medicago truncatula MTR_8g023880 N 0.872
MTR_8g023930 Medicago truncatula MTR_8g023930 I 0.894
OB08G13730 Oryza brachyantha OB08G13730 I 0.887
OBART04G14970 Oryza barthii OBART04G14970 I 0.886
OBART08G03460 Oryza barthii OBART08G03460 I 0.886
OGLUM04G14830 Oryza glumaepatula OGLUM04G14830 I 0.886
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.886
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.910
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.886
OLONG_023103 Oryza longistaminata OLONG_023103 I 0.881
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.886
ONIVA04G13100 Oryza nivara ONIVA04G13100 I 0.886
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.882
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.911
OPUNC06G00030 Oryza punctata OPUNC06G00030 N 0.872
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.886
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.914
ORGLA04G0119700 Oryza glaberrima ORGLA04G0119700 I 0.886
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.886
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.910
ORUFI04G16370 Oryza rufipogon ORUFI04G16370 I 0.886
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.882
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.910
OS04G0460600 Oryza sativa OS04G0460600 I 0.886
OS08G0157900 Oryza sativa OS08G0157900 I 0.882
OS08G0511200 Oryza sativa OS08G0511200 I 0.910
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.880
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.873
Pavir.Gb01850 Panicum virgatum Pavir.Gb01850 I 0.881
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.882
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I 0.884
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.902
Pm019659 Prunus mume Pm019659 I 0.901
Pm028711 Prunus mume Pm028711 I 0.949
Pm028722 Prunus mume Pm028722 I 0.873
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.888
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.922
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.915
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.911
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.895
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.908
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.904
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.904
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.880
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I 0.900
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.918
SapurV1A.0003s0310 Salix purpurea SapurV1A.0003s0310 N 0.894
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.884
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.923
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.885
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.897
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.893
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.893
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.893
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.924
Sb06g019010 Sorghum bicolor Sb06g019010 I 0.878
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.879
Si010553m.g Setaria italica Si010553m.g I 0.878
Si013369m.g Setaria italica Si013369m.g I 0.882
Si032702m.g Setaria italica Si032702m.g I 0.871
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.889
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.906
TCM_015535 Theobroma cacao TCM_015535 I 0.872
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.984
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.888
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.902
Traes_4AL_22CE41C6F Triticum aestivum Traes_4AL_22CE41C6F N 0.879
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.892
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.892
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.883
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.883
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.883
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.892
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.883
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N 0.909
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I 0.924
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.882